Methylomarinum roseum: Q9L42_016550
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Entry
Q9L42_016550 CDS
T10194
Symbol
rnc
Name
(GenBank) ribonuclease III
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
mech Methylomarinum roseum
Pathway
mech03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
mech00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
Q9L42_016550 (rnc)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mech03019
]
Q9L42_016550 (rnc)
03009 Ribosome biogenesis [BR:
mech03009
]
Q9L42_016550 (rnc)
03036 Chromosome and associated proteins [BR:
mech03036
]
Q9L42_016550 (rnc)
Enzymes [BR:
mech01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
Q9L42_016550 (rnc)
Messenger RNA biogenesis [BR:
mech03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
Q9L42_016550 (rnc)
Ribosome biogenesis [BR:
mech03009
]
Eukaryotic type
90S particles
RNase
Q9L42_016550 (rnc)
Prokaryotic type
rRNA processing factors
Q9L42_016550 (rnc)
Chromosome and associated proteins [BR:
mech03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
Q9L42_016550 (rnc)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ribonucleas_3_3
Ribonuclease_3
dsrm
DND1_DSRM
RM44_endonuclase
DSRM_DCL2
Motif
Other DBs
NCBI-ProteinID:
XBS19947
UniProt:
A0AAU7NSJ4
LinkDB
All DBs
Position
complement(3619220..3619903)
Genome browser
AA seq
227 aa
AA seq
DB search
MIRKPEELAKKLGLTFNNPQLFTLALTHRSMGAKNNERLEYLGDSVLGFVIARQLYEMFP
DAGEGILSRLRASLVNQSSLAELARMHNVGEYLILGAGELKSGGYRRDSILSDAMEAIMG
ALVKDQGIETCRLWILDLFADKLSELSADNWSKDPKTQLQELMQAKQLELPVYELVTQTG
AAHAQTFKVKCSVELIEQNCVGEGVSRKKAEQAAAEKMLHLLKSKNT
NT seq
684 nt
NT seq
+upstream
nt +downstream
nt
gtgatcaggaaacctgaagagcttgctaaaaagctgggattaacctttaataatccccag
ctttttaccctggccttgacgcatcgcagcatgggagcaaaaaacaatgaaagactggaa
tatctaggcgattcagtgctcggttttgtcatcgctcgacaactctatgaaatgttccct
gatgcgggcgaggggatcttgagccggttacgggccagcctggtcaatcagagttcgttg
gccgaattggccaggatgcataacgtaggcgaatatctgatactgggggcgggcgaactg
aagagcggcggctatcggcgcgattcgatcctgtccgatgcgatggaggcgatcatgggg
gccttggtgaaggatcagggcatcgaaacatgccggctatggatcctggatttgtttgcc
gataagttgtccgaattgagcgccgataactggagtaaggacccgaaaacgcaattacag
gaactgatgcaagccaaacaactggagctgccggtttatgagttggtgacccaaaccggc
gctgcccatgctcagacgttcaaggtcaaatgcagcgtagagttgattgagcagaactgt
gtcggtgagggggtctctagaaagaaggcggagcaagccgccgctgaaaaaatgttgcat
ttgttgaagagtaaaaatacatga
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