Methylocystis echinoides: RVU70_01135
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Entry
RVU70_01135 CDS
T10963
Name
(GenBank) deoxyribodipyrimidine photo-lyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
meci Methylocystis echinoides
Brite
KEGG Orthology (KO) [BR:
meci00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
meci03400
]
RVU70_01135
Enzymes [BR:
meci01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
RVU70_01135
DNA repair and recombination proteins [BR:
meci03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
RVU70_01135
Prokaryotic type
RVU70_01135
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
XCP55777
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All DBs
Position
complement(223716..225137)
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AA seq
473 aa
AA seq
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MAAPLILWFRNDLRLDDNPALDAAARSGAPVVALYVLDDESAGRWRMGAASRWWLHHSLA
ALAADLGRLGVSLILRRGRAEFVLEGLIEETGAGAVYWNRLYEPWAMRRDSEIKASLRAL
GLTVESFNGALLFEPAHMRNKQGETFKVFSPFWRACLASGGPPPPLPAPKKLAAARAPES
DALDDWRLPPTKPDWAQGLRETWRVGEKAARARLSEFAKDRLRDYKTARDFMGEEGTSRL
SPHLHFGEVSPRRVWAEATSQAGEAGLPFLRELGWREFCHHLLVAFPEMPDRGLDKRFDA
FSWRDDPAALAAWRKGVTGYPLVDAGMRQLWLTGYMHNRARMVAASFLIKHLLIPWQIGE
RWFWDTLVDADLANNSGGWQWVAGCGADAAPYFRVFNPVLQGEKFDPYGDYVRRYVPELA
GLDARWIHRPWEAPADVLGQAGVRLGESYPRPIVDHAEARARALAAFEDVRLN
NT seq
1422 nt
NT seq
+upstream
nt +downstream
nt
atggccgcgccgctcatcctctggtttcgaaacgacctgcgcctcgacgacaacccggcg
ctggacgccgccgcccgcagcggcgcgccggtcgtcgctctttatgttctcgacgacgag
agcgccgggcgctggcgcatgggcgccgcgagccgctggtggctgcatcattcgctcgcg
gcgctcgccgccgatctcgggcggctcggcgtgtcgctgatcttgcggcgcgggcgcgcc
gaattcgtgctcgaagggctgatcgaggagacaggcgcgggcgcggtttactggaaccgg
ctctatgagccctgggcgatgcggcgcgacagcgagatcaaggcgtcgctgcgcgcgctt
gggctcacggttgagagcttcaatggcgcgctgttgttcgagccggcgcatatgcgcaac
aaacagggcgagacgttcaaggttttctcccccttctggcgcgcctgcctcgcgagcggc
ggaccgccgccgccgctgccggcgcccaaaaagctcgccgccgcgcgggcgcccgaaagc
gacgcgctcgacgactggcgtctgccgccgacaaagcccgattgggcgcagggactgcgc
gagacctggcgcgtcggggaaaaggccgcgcgggcgcgactttccgaattcgcgaaggac
cgcttgcgcgattacaagacggcgcgcgacttcatgggcgaagaggggacctcccggctg
tcgccacatcttcatttcggcgaggtttcgccgcgccgcgtctgggcggaggcgaccagc
caggccggcgaagccggccttccgttcttgcgcgaactcggttggcgcgaattctgccat
cacctgctcgtcgccttccccgaaatgcccgatcgcgggctcgacaagcgtttcgacgcc
ttctcatggcgagacgatcccgcggcgctcgcggcgtggcgcaagggcgtgaccggctat
ccgctcgtcgacgcgggcatgcgccagctctggctcacgggctacatgcacaatcgcgcg
cgcatggtggcggcgagctttctcatcaagcatctgctcattccatggcagatcggcgag
cgctggttctgggatacgctggtcgacgccgatctcgccaacaacagcggcggctggcaa
tgggtcgcgggctgcggcgccgacgccgcgccgtatttccgggtgttcaacccggtgctg
cagggcgagaaattcgacccctatggcgactatgtgcgccgttatgtgccagagctcgcc
ggactcgacgcgcgctggattcaccggccctgggaggcgcctgcggatgtgctgggccaa
gccggcgtgcggctcggcgagagctatccgcgtccgatcgtcgaccatgcagaggcgcgc
gcgcgggcgctggcggcgttcgaggacgtgcggctcaattga
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