Methylocystis echinoides: RVU70_03180
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Entry
RVU70_03180 CDS
T10963
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
meci Methylocystis echinoides
Pathway
meci00300
Lysine biosynthesis
meci00470
D-Amino acid metabolism
meci01100
Metabolic pathways
meci01110
Biosynthesis of secondary metabolites
meci01120
Microbial metabolism in diverse environments
meci01230
Biosynthesis of amino acids
Module
meci_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
meci00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
RVU70_03180 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
RVU70_03180 (dapF)
Enzymes [BR:
meci01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
RVU70_03180 (dapF)
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Paralog
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Motif
Pfam:
DAP_epimerase
PhzC-PhzF
Motif
Other DBs
NCBI-ProteinID:
XCP56151
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Position
670567..671427
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AA seq
286 aa
AA seq
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MPHPLDNRPILRMNGAGNEILVLDLRGLDHVLAPQEARAIAAAPGLRFDQLMAVHDPRAE
GDDAFMRIYNVDGSRSGACGNGTRCVAYALAREGKERLLLATDAGRIETRREAETLFTVD
MGEPRLDWREIPLARQADTRAVALDPPVEGAPAHFSAVSMGNPHAVFFVPDARAVALETL
GGKLERHPLFPERANISFAQILARDDILLRVWERGTGATQACGSAACATLVAAVRAGLSE
RRARLRLPGGDLTIDWRTDNHVLMTGPVEFEFEARLTAALFEDAAT
NT seq
861 nt
NT seq
+upstream
nt +downstream
nt
atgccgcatccgctcgacaatcgaccgatcctgcgcatgaacggcgcgggcaatgaaatt
ctggtgctcgacctgcgcgggctcgaccatgtgctcgctccgcaggaggcgcgcgccatc
gcggccgcgccgggcctgcgcttcgaccagctgatggcggtgcacgacccgcgcgccgag
ggcgacgacgccttcatgcgcatctacaatgtcgacggttcgcgttcgggcgcctgcggc
aatggaacccgctgcgtcgcctatgcgctcgcaagggaaggcaaggagcggctcctgctc
gcaaccgacgccggccggatcgagacgcggcgcgaggcggagacgctgttcaccgtcgac
atgggcgagccgcggctggattggcgcgagatcccgctcgcgcggcaggccgacacccgc
gccgtggcgctggacccgccggtcgaaggcgcgccggcgcatttttcggccgtcagcatg
ggcaatccgcatgcggtgttcttcgtgccggacgcgcgcgccgtcgcgctcgagacgctc
ggcgggaagctcgaacgccacccgctcttccccgagcgcgccaatatttccttcgcgcag
atcctcgcgcgcgacgacattctgctgcgcgtctgggagcgcggcacgggcgccacccag
gcctgcggctcagcggcctgcgccacgctcgtcgccgccgtgcgcgccgggttgagcgag
cggcgcgcacgtctgcggctgcctggcggcgacctcacgatcgactggcgcaccgacaat
cacgtgctgatgaccggaccggtggaattcgaattcgaggcgcggctcacggccgcgcta
ttcgaggatgcggcgacgtga
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