Methylocystis echinoides: RVU70_03185
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Entry
RVU70_03185 CDS
T10963
Name
(GenBank) MiaB/RimO family radical SAM methylthiotransferase
KO
K15865
threonylcarbamoyladenosine tRNA methylthiotransferase [EC:
2.8.4.5
]
Organism
meci Methylocystis echinoides
Brite
KEGG Orthology (KO) [BR:
meci00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
meci03016
]
RVU70_03185
Enzymes [BR:
meci01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.5 tRNA (N6-L-threonylcarbamoyladenosine37-C2)-methylthiotransferase
RVU70_03185
Transfer RNA biogenesis [BR:
meci03016
]
Eukaryotic type
tRNA modification factors
Methylthiotransferase
RVU70_03185
Prokaryotic type
Methylthiotransferases
RVU70_03185
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Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
UPF0004
B12-binding
DUF3079
DUF2880
Motif
Other DBs
NCBI-ProteinID:
XCP56152
LinkDB
All DBs
Position
671424..672596
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AA seq
390 aa
AA seq
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MSAPAHPVETLTFGCRLNMVDSEALAREHAGAADAVIVNTCAVTAEATRQARQAIRRLHR
ERPQAQIVVAGCAARIDPQSFEAMSGVSRVIAEQPATRAAAAEEGTRGFLAVQNGCDHSC
TFCIIPAGRGASRSAAPQEIVAQARALVEKGKQEIVLTGVDLTSYDADGLKLGGLVRLLL
GAVKDLARLRLSSIDCIEADKELFVAFSEEARLCPHLHLSLQSGDDLILKRMKRRHLRAD
AIRFCKALRDARPDIVFGADFIAGFPTETEEMFAQTLALVDDCGLTHLHVFPFSPRPGTP
AARMPQVAHDVAKARAAMLRQRGEQALARHLDAQQGKTLRLLVERGGMARAADFTLAHTP
EVPAGRMIEARVTGHDGRALEVAFERSASP
NT seq
1173 nt
NT seq
+upstream
nt +downstream
nt
gtgagcgcgccggcgcacccagtcgagacccttaccttcggctgccgactgaatatggtc
gactccgaagcgcttgcacgtgaacacgccggcgcggccgacgccgtcatcgtcaatact
tgcgccgtcaccgctgaagcgacgcgacaggcgcgtcaggccatacgtcgactgcatcgc
gaaaggccgcaggcgcagatcgtcgtggccggctgcgcggcgcgcatcgatccccaaagc
ttcgaagcgatgtcgggagtctcgcgcgtcatcgccgaacagccggcgacgcgtgcggcg
gcggcggaggagggcacgcgcggcttcctcgccgtgcagaacggctgcgatcacagctgc
accttctgcatcatcccggcggggcgcggcgcttcccggtcggcggcgccgcaggaaatt
gtcgcccaagcccgcgcgctcgtcgagaaaggcaagcaggagatcgtgctgaccggcgtc
gatctgacgagctacgacgccgatggactgaaactcggcgggctcgtgcggttgctgctc
ggcgcggtcaaagatctcgcccggctgcgcctctcgtcgatcgactgcatcgaagcggat
aaggagctgttcgtcgcgttcagcgaggaagcgcgtctttgcccgcatctgcatctctcg
ctgcaatccggcgacgacctcattctcaagcgcatgaagcggcgccatttgcgcgccgac
gccatccgcttctgcaaagccttgcgcgacgcgcggcccgatatcgtcttcggcgccgat
ttcattgcgggctttcccacagagacggaagagatgtttgcgcagacgctcgcgctcgtc
gacgactgcggcctgacgcatctgcatgtctttcccttttcgccgcgccccgggacgccg
gcggcgcgcatgccgcaggttgcgcacgacgtcgccaaggcgcgtgcggcgatgctgcgg
caaaggggcgaacaggccctcgcgcgccatctcgacgcgcagcagggcaagaccctgcgc
ctcctcgtcgaacgcggcggcatggcgcgcgcggccgatttcacgttggcgcatacgccg
gaggttcctgccggccgcatgatcgaggcgcgcgtgactggacacgacggacgcgcgctc
gaggtcgccttcgagcgcagcgcgtcgccgtag
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