Methylocystis echinoides: RVU70_04005
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Entry
RVU70_04005 CDS
T10963
Symbol
fdhF
Name
(GenBank) formate dehydrogenase subunit alpha
KO
K00123
formate dehydrogenase major subunit [EC:
1.17.1.9
]
Organism
meci Methylocystis echinoides
Pathway
meci00630
Glyoxylate and dicarboxylate metabolism
meci00680
Methane metabolism
meci01100
Metabolic pathways
meci01120
Microbial metabolism in diverse environments
meci01200
Carbon metabolism
Brite
KEGG Orthology (KO) [BR:
meci00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
RVU70_04005 (fdhF)
09102 Energy metabolism
00680 Methane metabolism
RVU70_04005 (fdhF)
Enzymes [BR:
meci01000
]
1. Oxidoreductases
1.17 Acting on CH or CH2 groups
1.17.1 With NAD+ or NADP+ as acceptor
1.17.1.9 formate dehydrogenase
RVU70_04005 (fdhF)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Molybdopterin
Molydop_binding
Fer2_4
NADH-G_4Fe-4S_3
Molybdop_Fe4S4
Fer4_7
Fer4
Fer4_Nqo3
Fer4_10
Fer4_6
Fer4_9
Fer4_21
Fer4_15
Fer4_2
Fer4_8
Fer4_4
Fer4_16
TPP_enzyme_M
Fer4_NDSU1
pXO2-72
Motif
Other DBs
NCBI-ProteinID:
XCP56308
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All DBs
Position
complement(840048..842927)
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AA seq
959 aa
AA seq
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MTLIKEIDYGTPQSKSENMVTLTIDGKSVTVPEGTSIMRAAMEAGTEIPKLCATDSIKAF
GSCRLCVIEIDGRNGTPASCTTPVAPGIAVKTQTPRLAAIRRGVMELYISDHPLDCLTCA
ANGDCELQDMAGAVGLRDVRYGYDGANHVFARNSGEANFNWKPKDESNPYFTYDPSKCIV
CNRCVRACEEVQGTFALTISGRGFDSRVSPGMDEAFMESECVSCGACVQACPTATLTENS
VIAIGQPEHSEITTCAYCGVGCTFKAEMRGEEVVRMVPWKDGKANHGHSCIKGRFAYGYA
HHGDRILDPMIRESIDEPWRVVSWDEALTFAADRLSAVQAKYGKGSVGAITSSRCSNEET
YLVQKLVRAGFGNNNVDTCARVCHSPTGYGLNQAFGTSAGTQDFDSVDEADVILVIGANP
TDAHPVFGSRMKARLRDGAKLIVIDPRRIDLVRSPHVEADYHLALKPGTNVAMITALAHV
IVKEGLVNESFVRHRCDWDEFQAWADYVSLDRNSPEALESVLGVKAEDIRGAARLYARGG
NAAIYYGLGVTEHSQGSTTVMGIANLAMATGNLGRRGVGVNPLRGQNNVQGSCDMGSFPH
ELPGYQHISGAAARSVFEADWGVKLDPEPGLRIPNMFDAAIEGRFKGLYLQGEDILQSDP
DTRHVSAALANMEIVIVQDLFLVESAHYAHVFLPGSSFLEKDGTFTNAERRIQRIRKVMT
PKNGYGDWEITQLLANKLGMKWNYKNPSEVMDEIARLTPSFHNVSYDLLEEVGSVQWPCN
DDAPDGMPIMHIDGFARGKGKFVITEYVPTDEKVGPRFPLLLTTGRILSQYNVGAQTRRT
ENSRWHEEDVLEIHPHDAEERGVCEGDWVKVASRAGETTLRAQITDRVAPGVVYTTFHHP
LCNTNVVTTDNSDWATNCPEYKVTAVQISKSNGPTEFQEKYRELSDNARRIASTIDAAE
NT seq
2880 nt
NT seq
+upstream
nt +downstream
nt
atgacgcttatcaaagagattgattacgggacgccacagtccaaatccgaaaacatggtc
acgctgaccatcgacggaaagagcgtcactgttccggagggcacctccatcatgcgcgcg
gcgatggaggcgggaaccgaaatcccgaagctctgcgccacggacagcatcaaggcgttc
ggctcctgccgcctgtgcgtgatcgagatcgacggccgcaacggcacgccggcttcctgc
accacgccggtcgcgcccggcatcgccgtcaagacccagaccccccgcctcgccgccatc
cgtcgcggcgtgatggagctttatatctccgaccacccgctcgactgtctgacctgcgcc
gccaatggcgactgcgaattgcaggacatggccggcgcggtcggcctgcgcgacgtgcgc
tacggctatgacggcgccaaccacgtcttcgcccgcaacagcggcgaggcgaacttcaac
tggaaaccgaaggacgagtcgaacccctatttcacctatgacccgtccaagtgcatcgtt
tgtaaccgctgcgtgcgcgcctgcgaggaagtgcagggcacattcgcgctgacgatctcc
ggccgcggctttgattcgcgcgtgtcgcccggcatggacgaagccttcatggagtcggaa
tgcgtctcctgcggcgcctgcgtgcaggcctgcccgaccgcgacgctgaccgagaactcc
gtcatcgccatcggccagccggagcattccgagatcaccacctgcgcctattgcggcgtc
ggctgcaccttcaaggccgagatgcgcggcgaggaagtcgtccgcatggtcccctggaag
gacggcaaggccaatcacggccatagctgcatcaagggccgcttcgcctatggctacgcc
catcacggggaccgtatcctggacccgatgatccgcgagtcgatcgacgagccgtggcgg
gtcgtctcctgggacgaggctctgaccttcgccgccgaccgtctcagcgccgtgcaggcg
aaatacggcaaggggtcggttggcgcgatcacctcgtcgcgctgctcgaacgaagagacc
tatctcgttcagaagctcgtgcgcgccggcttcggcaacaacaatgtcgacacctgcgcc
cgcgtctgccattcgccgaccggctatggcctcaaccaggccttcggcacctcggccggc
acgcaggacttcgactcggtcgacgaggccgacgtcattctcgtcatcggcgccaatccg
accgacgcccatccggtgttcggctcgcgcatgaaggcgcgcctgcgtgatggcgccaag
ctgatcgtcatcgatccgcgccgcatcgacctcgtgcggtcgccccatgttgaggccgac
taccatctggcgctgaagcccggcaccaatgtcgcgatgatcacggcgctcgcccatgtc
atcgtgaaggaaggcctcgtcaacgaatccttcgtccgccatcgctgcgactgggacgaa
ttccaggcctgggccgattacgtttcgctcgaccgcaacagtcccgaggccctcgaatcc
gtcctcggcgtgaaggccgaagacattcgtggcgcggcgcgtctctatgcgcgcggcggc
aatgccgcgatctattacggcctcggcgtgacggagcattcgcaaggctcgaccaccgtg
atgggcatcgccaatctcgccatggcgaccggcaatctcggccgccgcggcgtcggcgtg
aacccgctgcgcggccagaacaatgtgcagggctcctgcgacatgggctcgttcccccat
gaactgccgggctatcagcacatttcgggcgcggccgcgcggtcggtgttcgaggccgac
tggggcgtcaagctcgatcccgagcccggcctgcgcattcccaacatgttcgacgcggcg
atcgagggccgcttcaagggtctttatctgcagggcgaggacattctccagtccgacccg
gacacgcgccatgtttcggcggcgctcgccaatatggaaatcgtgatcgtgcaggacctg
ttcctggtggagtcggcgcattatgcgcatgtcttcctgccgggctcctccttcctcgag
aaggacggcaccttcaccaacgccgagcgccgcatccagcgcatccgcaaggtgatgacg
ccgaagaacggctatggcgactgggagatcacccagctcctcgccaacaagctcgggatg
aagtggaactacaagaacccgtccgaggtcatggacgagatcgcgcggctcacgccgtcg
ttccacaacgtctcttacgacctgctcgaggaagtgggctcggtgcagtggccgtgtaac
gacgacgcgccggacggcatgccgatcatgcacatcgacggcttcgcgcgcgggaagggc
aaattcgtcatcaccgaatatgtcccgaccgacgagaaggtggggccgcgcttcccgctg
ctgctgaccaccggccgcatcctgtcgcagtacaacgtcggcgcgcagacccgccgcacc
gagaacagccgatggcatgaggaagacgtgctcgaaatccatccgcatgacgcggaagag
cgcggcgtctgcgagggcgattgggtgaaggttgcgagccgcgccggcgagacgacgctg
cgcgcccagatcaccgatcgcgtggcgcccggcgtggtctacacgaccttccaccacccg
ctgtgcaacaccaatgtcgtgaccaccgacaattcggactgggcgaccaactgtccggaa
tacaaggtgacggccgttcagatctcgaagagcaacggccccaccgagttccaggagaag
tatcgcgaactgtccgacaatgcgcggcggatcgcgagcaccatcgacgcggcggaatga
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