Methylocystis echinoides: RVU70_04065
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Entry
RVU70_04065 CDS
T10963
Name
(GenBank) UvrD-helicase domain-containing protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
meci Methylocystis echinoides
Pathway
meci03420
Nucleotide excision repair
meci03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
meci00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
RVU70_04065
03430 Mismatch repair
RVU70_04065
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
meci03400
]
RVU70_04065
Enzymes [BR:
meci01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
RVU70_04065
DNA repair and recombination proteins [BR:
meci03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
RVU70_04065
MMR (mismatch excision repair)
Other MMR factors
RVU70_04065
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
AAA_30
Viral_helicase1
UvrD_C_2
PcrA_UvrD_tudor
AAA_11
DUF3553
Motif
Other DBs
NCBI-ProteinID:
XCP56319
UniProt:
A0ACH2DJB2
LinkDB
All DBs
Position
853382..855703
Genome browser
AA seq
773 aa
AA seq
DB search
MSDLEDYTPRDGGLAARAAAAAQRPRYLDGLNPEQRAAVETLDGPVLVLAGAGTGKTRAL
TTRIAHILALGKARAYEILAVTFTNKAAREMRERVEMLVGEGAQAMQWLGTFHAISAKIM
RRHAELVGLKPNFTILDTDDQIRLLKQVLQAENIDDKRWPARALAMRIDGWKNRGLLPNQ
VPAGDAESFANGKGAALYALYQERLKILNAVDFGDLLLESLRLFRENPDVLADYQKRFKY
ILVDEYQDTNTAQYLWLRLISQGRRNVCCVGDDDQSVYGWRGAEVENILRFEQDFPGAKI
VRLERNYRSTGHILAAASHLIGHNEGRLGKTLFTDGEDGEKPTLTGVWDSEEEARVIGED
IEQLQRRDHSLEEIAILVRASFQMREFEERFVEIGLPYRIIGGPRFYERAEIRDALAYLR
CVAQPADDLAFERIVNTPKRGLGDATLQLLHEYGRRERVPLMQAARALVETEELKAKPRG
ALKSLIADFDRWRSLIDAKPQNELAEMVLDESGYTEMWRQDKTPEAAGRLENLKELVRAM
EQFPDLAGFLEHVSLVMEAEEGKSQERVSIMTLHAAKGLEFETVYLPGWEEGLFPHQRSL
DEQGRAGLEEERRLAYVGLTRAKRRAKIFFASNRRIRGLWQPTVPSRFVDNLPPTHVEVV
EAPSGSQYGGYAVSRFANLDVYGSDYSTPGWKRAQAARTEPAREKPARAKQPVTIDGEII
ARSSTASRYGAGSRVFHLKFGPGTVAAVDGNKCTVDFDKAGRKMVLESFLQAG
NT seq
2322 nt
NT seq
+upstream
nt +downstream
nt
ttgtccgatctggaagattacacgccgcgcgacgggggtctcgccgcccgggccgcagcg
gcggcgcagcggccgcgctatctcgacggattgaaccccgagcagcgcgcggcggtcgag
acgctcgacggaccggtgctggttctcgccggcgccggcaccggcaagacgcgcgcgctc
accacgcgcatcgcccatatcctcgcgctcggcaaggcgcgcgcctatgagatcctcgcc
gtcaccttcaccaacaaggccgcgcgcgaaatgcgcgagcgcgtcgaaatgctcgtcggc
gagggcgcgcaggcgatgcaatggctcggcacctttcacgcgatcagcgccaagatcatg
cgccgccacgccgagctcgtcgggctcaagcccaatttcaccatcctcgacacggacgac
cagatccgcctcttgaagcaggtgctgcaggcggaaaacatcgacgacaagcgctggccg
gcgcgcgcgctcgccatgcgcatcgacggctggaagaaccgcggccttctgccgaaccag
gtgccggccggcgacgccgagagtttcgccaatggcaagggcgcggcgctttacgcgctc
tatcaggaacgcttgaaaattctcaacgccgtcgacttcggcgacctgctgctcgagtcg
ctcaggctctttcgcgaaaaccccgacgtgctcgccgactatcagaagcgcttcaaatat
atcctcgtcgacgaatatcaggacaccaacaccgcgcaatatctgtggctgcggctgatc
tcgcaggggcgccgcaacgtctgctgcgtgggcgacgacgatcagagcgtctatggctgg
cgcggcgccgaagtcgaaaacatcctgcgtttcgaacaggactttcccggcgccaagatc
gtgcggctcgaacgcaattaccgctccacgggccatattctcgccgccgcctcgcatctc
atcggacataatgagggccgcctcggcaagacgctgtttaccgacggcgaggacggcgaa
aagccgacgctcaccggggtctgggacagcgaggaggaagcgcgcgtcatcggcgaagac
atcgagcaattgcaacgtcgcgaccattcgctcgaagagatcgccattctcgtgcgcgcc
tcctttcagatgcgggaattcgaagagcgtttcgtcgagatcggcctgccctatcgcatc
atcgggggcccgcgcttctatgagcgggcggaaatccgcgacgcgctcgcctatctgcgc
tgcgtcgcgcagcctgccgacgatctcgccttcgagcgcatcgtcaatacgcccaagcgc
ggcctgggcgacgcgacgctgcaattgctgcatgaatatggccgccgcgagcgcgtccct
ctcatgcaggcggcgcgcgcgctcgtcgagacggaggagctgaaggcgaagccgcgcggc
gccctgaaaagccttatcgccgactttgaccgctggcgcagcctcatcgacgcgaagccg
caaaatgagctcgccgaaatggtgctcgatgagtccggctatacggagatgtggcggcag
gacaagacgccggaggccgccggccggctcgagaacctcaaggaactcgtgcgcgcgatg
gagcagtttcccgaccttgcgggcttcctcgagcatgtgtcgctcgtgatggaggcggag
gaaggcaagagccaggagcgcgtctcgatcatgacgctgcacgccgctaaggggctcgaa
ttcgagacggtctatctgcccggctgggaggaaggtctctttccgcatcagcgctcgctc
gacgagcagggccgcgcgggcctcgaagaggagcggcgcctcgcttatgtcgggctcacg
cgcgcgaaacgccgcgccaaaatcttcttcgccagcaaccgccgcattcgcggcctgtgg
cagccgaccgtgccgtcgcgcttcgtcgacaatctgccgccgacccatgtcgaggtggtc
gaagcgccgagcggttcgcaatatggcggctacgccgtctcgcgcttcgccaatctcgac
gtctatggctccgactattcgacgcccggctggaaacgcgctcaggccgcccgcaccgag
cccgcccgtgagaaacccgcgcgggccaagcagcccgtgacgatcgacggcgaaattatc
gcgcgctcctcgacggcgtcacgctatggcgcgggctcgcgcgtgttccacctgaaattc
ggccccggcacggtggcggccgtcgacggcaacaaatgcaccgtggatttcgacaaggcc
gggcggaagatggtgctggagagctttttgcaggcggggtga
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