Methylocystis echinoides: RVU70_07240
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Entry
RVU70_07240 CDS
T10963
Name
(GenBank) UdgX family uracil-DNA binding protein
KO
K21929
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
meci Methylocystis echinoides
Pathway
meci03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
meci00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
RVU70_07240
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
meci03400
]
RVU70_07240
Enzymes [BR:
meci01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
RVU70_07240
DNA repair and recombination proteins [BR:
meci03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
RVU70_07240
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Hrs_helical
Motif
Other DBs
NCBI-ProteinID:
XCP56921
LinkDB
All DBs
Position
complement(1493355..1493975)
Genome browser
AA seq
206 aa
AA seq
DB search
MSEFMTLAALAGEEEICTRCPLYQNATQAVPGEGPRGARVMFVGEQPGDVEDLSGRPFVG
PAGRILDKALAKVHLPREQCFVTNAVKHFKFEPRGKRRLHKKPDAGEIDACRWWLEQERA
LVAPGLIVALGATAIRGVLGRPASVSQSRGRLIDLDQGAKFLATIHPSFLLRLQEEEDKR
REWTRFLSDLEIAAEWARAGDMPANV
NT seq
621 nt
NT seq
+upstream
nt +downstream
nt
atgtccgagttcatgaccctggccgcgctcgccggcgaggaagaaatctgcacccgctgt
ccgctgtatcagaacgccacgcaagccgttccgggggaagggccgcgcggcgcgcgggta
atgttcgtcggcgagcagccgggcgacgtcgaagacctctcggggcgccccttcgtcggg
cccgccggccggattctcgacaaggcgctggccaaagtccatctgccgcgcgagcaatgt
ttcgtcaccaacgccgtcaagcatttcaaattcgagccgcgcggcaagcggcgcctgcac
aagaagcccgacgccggcgaaatcgacgcctgccgctggtggctcgaacaggagcgcgcc
cttgtcgcgcccgggctgatcgtcgccctcggcgccacggcgatccgcggcgtgctcggg
cgccccgcgtcggtctctcaatcgcgcggccgcttgatcgacctcgaccagggcgcgaaa
ttcctcgccaccatccatccgtctttcctgctgcgcctgcaggaggaagaagataagcgg
agggaatggacgcgctttctcagcgatctggagatcgccgcggaatgggcgcgggcgggg
gacatgccggcgaatgtttag
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integrated database retrieval system
