KEGG   Methylocystis echinoides: RVU70_07380
Entry
RVU70_07380       CDS       T10963                                 
Symbol
dnaQ
Name
(GenBank) DNA polymerase III subunit epsilon
  KO
K02342  DNA polymerase III subunit epsilon [EC:2.7.7.7]
Organism
meci  Methylocystis echinoides
Pathway
meci03030  DNA replication
meci03430  Mismatch repair
meci03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:meci00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    RVU70_07380 (dnaQ)
   03430 Mismatch repair
    RVU70_07380 (dnaQ)
   03440 Homologous recombination
    RVU70_07380 (dnaQ)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:meci03032]
    RVU70_07380 (dnaQ)
   03400 DNA repair and recombination proteins [BR:meci03400]
    RVU70_07380 (dnaQ)
Enzymes [BR:meci01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     RVU70_07380 (dnaQ)
DNA replication proteins [BR:meci03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     RVU70_07380 (dnaQ)
DNA repair and recombination proteins [BR:meci03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     RVU70_07380 (dnaQ)
SSDB
Motif
Pfam: RNase_T Rv2179c-like RNase_H_2 DNA_pol_A_exo1 CAF1 DEDDh_C
Other DBs
NCBI-ProteinID: XCP56948
LinkDB
Position
1521425..1522153
AA seq 242 aa
MREIVFDTETTGLDPAQGHRVVEIGAVEISNLIPTGRIFHAYIDPERDMPEEAFRVHGLS
REFLLQHRKFREIVAEFVDFIEDSPLVAHNAEFDVRFLNAEFALQKLPALSPARIIDTLA
MARRLHPGSPASLDALCQRYGVDLSRRDKHGALLDAGLLAEVYAELRGGRQAALSLATVG
VARRAQIGNDLLRARPAPLRGRLTALEDEAHRAFLSTLGKAALWDKYLPQIEESGEQPPS
AA
NT seq 729 nt   +upstreamnt  +downstreamnt
atgcgcgaaattgtcttcgataccgaaaccaccggcctcgatccggcgcagggccaccgc
gtcgtcgagatcggcgcggtcgagatttccaatctcatcccgaccggccgcatcttccac
gcttatatcgaccccgagcgcgacatgccggaggaggcctttcgcgttcacggcctctcg
cgtgaattcctgctgcagcaccggaagtttcgcgagatcgtggcggaattcgtcgatttc
atcgaggacagtccgctcgtcgcccacaacgccgaattcgacgtgcgcttcctcaacgcc
gaattcgctttgcagaaattgccggcgttgtcgcccgcccgcattatcgacacgctcgcc
atggcgcggcggcttcaccccggcagtccggcgtcgctcgacgcgctctgccagcgttac
ggcgtcgatctatcgcggcgcgacaagcatggcgctttgctcgacgccgggctcctggcg
gaggtctatgccgagttgcgcggcggacggcaggcggcgctgtcgcttgcaaccgtcggc
gtcgcgcgtcgcgcgcaaatcggaaatgatctgttgcgcgcgcggccggccccgcttcga
ggccgtctgaccgcgctcgaggacgaggcgcatcgcgccttcctgtccacgctcgggaag
gccgccctctgggacaaatatctgccgcagattgaagaaagcggagagcaaccgccctcc
gccgcttga

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