Methylocystis echinoides: RVU70_13040
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Entry
RVU70_13040 CDS
T10963
Symbol
addA
Name
(GenBank) double-strand break repair helicase AddA
KO
K16898
ATP-dependent helicase/nuclease subunit A [EC:
5.6.2.4
3.1.-.-]
Organism
meci Methylocystis echinoides
Brite
KEGG Orthology (KO) [BR:
meci00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
meci03400
]
RVU70_13040 (addA)
Enzymes [BR:
meci01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
RVU70_13040 (addA)
DNA repair and recombination proteins [BR:
meci03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
RVU70_13040 (addA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
PDDEXK_1
AAA_19
UvrD_C_2
AAA_30
DEAD
NPHP3_N
Motif
Other DBs
NCBI-ProteinID:
XCP54513
LinkDB
All DBs
Position
2685540..2688971
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AA seq
1143 aa
AA seq
DB search
MSDRAYLSLTIQKQHKAADPQASAWVSAHAGSGKTYVLTQRVLRLLLEGVRPSQILCLTF
TKAAAANMSARIFARLAEWAVLDDCALAQKIVETGAEAPSPRQLDFARSLFARAVETPGG
LKIQTIHAFCERLLHSFPFEANAPAGFSVLDDAGRAELLEAAKRRAIEKAKSEPGPLHDA
LARVASETTEQGFDELCAAILQKREALAQAHQWKSYERRLRARLGLEAGETLAQIEAEMI
EGREQWPELANRLGLGSPKDKALLAHLERAIALAPGTDCIECYLSVFFTKDGDARGGDKR
AIITKGLRDEAPGLLEEMQAEQDRLAGLIEKRKAAAAAERSLALAQLGESIVSQYEQAKR
YRNALDYDDLIEGAWRLLNRSEPSWVLYKLDSQIDHILLDEAQDTSARQWEILTAIVQEF
CAGLGARRAARSFFAVGDDKQSIFSFQGAAPDKFDSMRRVLTSRFVAVEQRFEYVQLTQS
FRSAPGVLSAVDAVFNFAGNSEGLTCDPDPNRPPLTHESTKPHVHALVEVWEPIGPIDKE
EPEDWRLPLDYAKATDPGERLARKITAKIKSLLAPGSGEYVEDRFGPRPIEPRDILIVVR
KRGAFFEALIRALKAEDVPVAGADRLDLATHIAVNDLVALGRALLLADDDLTLATVLKSP
LIGLDDDDLIALAPKRRGALVDALRQSPEARHRMAAEKLSTWRREAARLAPYEFYSLVLG
PGGGRRRLVARLGPEANDAIDEFLRLAMSHEREEAPSLVRFLAMIEGLDLSIKRDMEAAG
SAVRVMTAHAAKGLEAKIVFLPDTCSAPAGKHDPKLFTLGVGDELSLVWSRGKDNDPDAL
TQARVAHRAAEAAEHRRLLYVAMTRAEERLYIAGYHGKTPPAEGCWHRMVEAALEGDCER
LSDADGYILRRGHAPLRDDLGFGAAPTRAPAIPDFARTPAPAEPSPPPPLRPSNALAGAD
AFAAVESGAPNSRDALRVLIGRLTHALLQYLPACPASRREEAARRFLTLRGANLDEKTSG
DIIDAALRAIDDPRLADLFGPRSIAEADVYAALDEGLTVSGRIDRLAETEDSVLIADFKT
GRPHETPNAAQLRQLALYRAALRPLYPGKRLRCFIVFTQNAAIVEASDAALDDAFTRLVA
TTT
NT seq
3432 nt
NT seq
+upstream
nt +downstream
nt
atgagcgatcgcgcctatctttcgctgacgatccagaagcagcacaaggccgccgatcct
caggcctccgcctgggtttcggcccatgcgggttcgggcaagacctatgtgctgacgcag
cgcgtgctgcggctgctgctcgaaggcgtgcgcccgtcgcagatcctctgcctcaccttt
acaaaagcggcggccgcgaatatgtcggcgcgcatcttcgcccggctcgcggaatgggcc
gtgctcgacgattgcgcgctcgcccagaaaatcgtcgagaccggcgccgaagcgccctcg
ccgcgccagctcgacttcgcgcgcagcctgttcgcgcgcgcggtcgagacgcccggcggg
ctcaaaatccagacgattcacgccttctgcgaaaggcttttgcacagctttcccttcgag
gccaacgccccggccggcttcagcgtgctcgacgacgcggggcgcgcggagctgctggag
gcggcgaagcggcgtgcgatcgaaaaggcgaaaagcgaaccgggtccgctgcatgacgcc
ctcgcgcgcgtcgcttcggagacgacggagcagggcttcgacgaactatgcgcagcgatc
ttgcaaaagcgcgaggcgctggcgcaggcgcatcaatggaagagttacgagaggcggctg
cgggcgcggctgggtttggaggcaggggagacgctcgcacagatcgaagcggagatgatc
gaggggcgggagcaatggccggagttggcgaaccgcctcgggctgggctcgccgaaggac
aaggcgctcctcgcgcatctcgaacgggccatcgcgctcgcgccggggacggactgcatc
gaatgctacctctcggtcttcttcaccaaggacggcgacgcgcgcggcggcgacaaacgc
gccatcatcacaaagggcctgcgtgatgaagctcctggacttctcgaagaaatgcaggcg
gagcaggatcgtctggcggggctcatcgagaagcgcaaggcggcggccgccgcagagcgc
tcgcttgcgctcgcgcaactgggcgagtcgattgtcagccaatatgaacaggcgaagcgc
tatcgcaacgccctcgattacgatgatttgatcgaaggcgcctggcgcctgctcaatcga
tccgagccgtcctgggtgctttacaagctcgactcgcaaatcgaccacattttgctcgac
gaagcgcaggatacgagcgcgcggcaatgggaaatactcaccgccatcgtgcaggaattt
tgcgcgggcctcggcgcgcgccgcgctgcgcgtagtttcttcgccgtcggcgacgacaag
cagtcgatcttctcctttcagggcgccgcgcccgacaaattcgactccatgcggcgcgtc
ttgaccagccgctttgtcgctgtcgagcagcgtttcgaatatgtgcagctcacgcaatct
tttcgctcggcgcccggcgtgctttcagccgttgacgccgtcttcaatttcgccggcaat
agcgagggcctcacttgcgaccccgatcccaaccggccgccgctgacgcatgaatccacc
aagccgcacgtgcatgcgctcgtggaagtctgggagccgatcggcccgatcgacaaggag
gagcccgaggactggcggctgccgctcgattatgcgaaggcgaccgatccgggcgaaagg
ctcgcgcgtaaaatcacggcgaagatcaaatccctgctggcgcccgggagcggcgaatat
gtcgaagaccggttcggcccgcgtccgatcgagccgcgcgacattctcatcgtggtgcgc
aagcgcggcgcctttttcgaggcgctgatccgcgcgctgaaggcggaagatgtgccggtc
gccggcgccgaccggctcgatctcgccacgcatatcgccgtcaacgatctcgtggcgctg
ggccgcgctctgctgctcgccgatgacgatctgacgctggcgaccgtgttgaagtcgccg
ctgattggattggacgacgatgatctcattgctcttgcgccaaagcggcggggcgcgctc
gtcgacgcgctcaggcagtcgccagaggcgcgccatcgcatggccgcggagaaactttcg
acatggcgcagggaggcggcgcggcttgcgccttatgagttctacagcctcgttcttggg
cccggcggcggccggcgccggctggtggcgcggctcgggcccgaggccaatgacgcgatc
gacgagtttctgcggctggcgatgagccatgagcgcgaggaggcgccatcgctcgtgcga
tttctggcgatgatcgaggggctcgatctctcgatcaagcgcgacatggaagccgccggc
tccgcggtgcgcgtgatgaccgcccatgccgccaaggggctggaagccaaaatcgtgttc
ctgcccgatacctgcagcgcgccggccggcaagcatgatcccaagcttttcacgctgggc
gtcggtgatgaactgtcgctcgtctggtcgcgcggcaaggacaacgacccggacgcgctt
acgcaggcgcgcgtggcgcatcgcgccgcggaagcggccgaacatcggcgcctgctctac
gtcgccatgacgcgcgccgaggagcggctttatatcgccggctatcacgggaagaccccg
ccggcggaaggttgctggcatagaatggtcgaggcggcgctcgaaggggactgcgaaagg
ctttcggacgccgacggctatatcctgcgtcgcggccatgcgcctttgcgtgacgatctt
ggcttcggcgcggcgccaacgcgcgcgccggcgatccccgacttcgcgcgcacgcctgcg
ccagccgagccgtcgccgccgccgccgctgcgcccgtcgaacgcgctcgccggcgccgac
gcgtttgcggcggttgaaagcggcgcgccgaacagccgtgacgccctacgcgttctgatc
gggcgtctcacccatgcgttgctgcaatatcttccggcctgcccggcaagtcggcgggaa
gaggccgcgcggcggtttctcactctgcgcggcgcaaatctggacgagaagacgtcgggc
gacatcattgacgcggcgctgcgcgccatcgatgacccgcggcttgccgatctgttcggg
ccccgctccatcgctgaggccgacgtctacgccgccctcgatgaagggcttacagtctcg
ggccggatcgaccgactggcggagactgaggacagcgtgctcatcgccgacttcaagaca
ggccggccgcacgagaccccgaacgccgcgcagcttcgccagctcgcgctgtaccgcgcc
gcgctgcgcccgctctatcccggcaagcggctgcgctgcttcatcgtcttcacgcaaaac
gcagccatcgtcgaggcgtcggatgcagcgctggacgacgcgttcacacgcctcgtcgcc
acgacgacgtaa
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