Methylocystis echinoides: RVU70_14495
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Entry
RVU70_14495 CDS
T10963
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
meci Methylocystis echinoides
Pathway
meci03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
meci00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
RVU70_14495 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
meci03019
]
RVU70_14495 (recQ)
03400 DNA repair and recombination proteins [BR:
meci03400
]
RVU70_14495 (recQ)
Enzymes [BR:
meci01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
RVU70_14495 (recQ)
Messenger RNA biogenesis [BR:
meci03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
RVU70_14495 (recQ)
DNA repair and recombination proteins [BR:
meci03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
RVU70_14495 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
HRDC
Helicase_C
RecQ_Zn_bind
ResIII
HHH
Motif
Other DBs
NCBI-ProteinID:
XCP54792
LinkDB
All DBs
Position
complement(2959078..2960877)
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AA seq
599 aa
AA seq
DB search
MPQLPPQARALLKSVFGYDDFRPGQAEIIAAVLEGGPVLAVMPTGSGKSMCYQLPAIIEE
ALTVVVSPLIALMRDQVRQMRALGVAAATLNSTNSAEENEDARRAMRAGDLRLLFVSPER
LLMDGLIADLRRARPRRLAIDEAHCVSEWGHDFRPEYRDIGRAAEALGKLQVIGLTATAD
AATRADIAARLFPSSPQLFLHSFDRPNIALNFAVKDQPRRQLSRFLERHKGESGIIYCSS
RQRTEDLARYFADQGHDALAYHAGLDQETRNRNQDRFLREDGVIAVATIAFGMGVNKPDV
RFVAHADMPGSVEAYYQEIGRAGRDGLPADTLTLYSLDDMAFRRRRIDEKEIGEERRRIE
HERFSALAMLCETPRCRRQTLLAYFAEEASPCGRCDLCEGKVAVFDGVIPSQKALSAVYR
TGQRFGAGHIAEVLRGEPTEAVRRHGHDAIKTFGAGREHSKPEWASILRQLFAVGALQSA
SAEHGGFALTSKGEDILFGRETILLRSDPLTPRDRRRRKEAPSLDEATDRILAALKRKRR
ELAQEEGVPAYVIFADRTLIDMAEKRPATLDEMLSVHGVGERKLARYGDAFLEALNEAL
NT seq
1800 nt
NT seq
+upstream
nt +downstream
nt
atgccccagcttcccccgcaggcgcgcgcgcttctcaaatccgtcttcggctacgacgac
ttccggcctggccaggcggagatcatcgccgccgtgctcgagggcggcccggtgctcgcc
gtcatgccgaccggcagcggcaaatccatgtgctaccagcttccggcgatcatcgaggaa
gcgctgaccgtcgtggtctcgccgctcatcgcgctgatgcgcgatcaggtgcggcagatg
cgggcgctcggcgtcgccgcggcgacgctcaattcgacgaacagcgccgaagagaacgag
gacgcgcgccgcgccatgcgcgcgggcgatctgcgcctgctcttcgtctcgccggagcgt
ctgctgatggacggactcatcgccgatctgcgccgcgcgcggccgcgccgcctcgccatc
gacgaagcgcattgcgtctcggagtggggccacgacttccgccccgaatatcgcgacatc
ggccgcgccgcggaagcgctcggcaaattgcaggtcatcggcctcaccgccaccgccgac
gccgcgacgcgcgcggacatcgccgcgcgtctcttcccgtcgtcgccgcaactcttcctg
cacagcttcgaccggcccaacattgcgttgaacttcgccgtaaaggaccagccgcggcgg
caattgtcgcgctttctggaacgccacaagggcgagagcggcattatctattgttcgtca
cgccagcgcacggaagaccttgcgcgttacttcgccgatcagggccatgacgccctcgcc
tatcacgccggcctcgatcaggagacgcgcaaccgcaaccaggaccgtttccttcgcgaa
gacggcgtgatcgcggtcgcgaccatcgccttcggcatgggcgtcaacaagccggacgtg
cgctttgtcgcccatgccgacatgccaggctccgtcgaagcctattatcaggagatcggc
cgcgccggccgtgacgggctgcccgcagatacgctgacgctctacagtctcgacgatatg
gcgttccgccgccgccggatcgacgagaaggaaatcggcgaagagcggcgacgcatcgag
catgagcgtttctccgcgctggccatgctctgcgagacgccgcgctgccggcgccagacg
ctgctcgcctatttcgccgaggaagcgtcgccctgcgggcgctgcgacctgtgcgagggc
aaggttgcggttttcgacggggtcatcccctcgcaaaaagcgctgtccgcggtctatcgc
accgggcaacgcttcggcgccggccatatcgccgaggtgctgagaggcgagccgaccgag
gcggtgcgccgccatggacatgacgcaatcaagaccttcggcgccggcagggaacattca
aaaccggaatgggcctcgattctgcgccagcttttcgccgtcggggcgctgcaatcggcg
agcgcggaacacggcggcttcgcgctgacgtcgaagggcgaggacattctcttcggccgc
gagacaatccttctacgcagcgacccgctgacgccgcgcgatcgccgccgccgcaaagag
gcgccgagcctcgacgaagcaactgaccgcattctcgccgcgctgaaacgcaagcggcgc
gaactcgcgcaggaggaaggcgtcccggcttacgtcatctttgccgaccgcacgctgatc
gacatggcggaaaagcgtccggcgacgctcgacgagatgctgagcgttcatggcgtcggc
gagagaaaactcgcgcgctacggcgacgcttttctggaggcgctgaacgaggcgctgtga
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