Methylocystis echinoides: RVU70_21435
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Entry
RVU70_21435 CDS
T10963
Name
(GenBank) ATP-dependent RecD-like DNA helicase
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
meci Methylocystis echinoides
Pathway
meci03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
meci00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
RVU70_21435
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
meci03400
]
RVU70_21435
Enzymes [BR:
meci01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
RVU70_21435
DNA repair and recombination proteins [BR:
meci03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
RVU70_21435
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
AAA_30
HHH_RecD2
SH3_13
UvrD_C_2
HHH_5
OB_YrrC
Viral_helicase1
AAA_11
HHH_2
Helicase_RecD
nSTAND3
NTPase_1
PIF1
AAA_22
DEAD
AAA_16
HHH_3
UvrD-helicase
NACHT
MeaB
NPHP3_N
RsgA_GTPase
AAA_29
AAA_28
CbiA
SLFN-g3_helicase
AAA_24
AAA
HHH
TraI_hel_assoc_N
T2SSE
AAA_31
ABC_tran
FtsK_SpoIIIE
TrwB_AAD_bind
ATP_bind_1
cobW
NB-ARC
MobB
TsaE
ArsA_ATPase
SRP54
Motif
Other DBs
NCBI-ProteinID:
XCP57940
LinkDB
All DBs
Position
pME_3:121631..123748
Genome browser
AA seq
705 aa
AA seq
DB search
MRVKARGHRDLVTVVGHAATISAGEWITVTGEWVNDRNHGQQFKARFLKTSAPTTAEGIE
KYLASGMIRGIGPAYAKRMVKAFGDKVFDVIEAEPDRLKEVDGIGPIRAQRIVSAWAEQK
VVREIMVFLHSHGVGTARAVRIFKTYGADAVQVMTENPYRLARDIRGIGFKTADAIAMKL
GIEKTAMIRVRAGISYALTEAMDEGHCGLPIDKLLPLAGELLEVPQELVRTALDLELGEG
VVVRDQVAETDCVFLTGLYRAEQTIAQRLQTLLNGKLPWPWIDPTKALPWIEQKTGLALA
ERQNEAIRLALMTKVLVITGGPGVGKTTIVNSILRILAAKGVKLLLCAPTGRAAKRMTEA
TGFEAKTIHRLLEVDPKNGGFKKNDDNPIDCELLVVDEASMVDVMLMQALLKALPNDSAL
LVVGDIDQLPSIGPGQVLADIIQSGAVPVVRLTEVFRQAAQSRIILAAHNINKGIMPDLR
RPPSDSDFYFVAAAEPEKAVSTIVNLVKRRIPERFGFDPIRDIQVLCPMNRGGVGARSLN
VELQSVLNPAGEKKVERFGWTFAPRDKVMQIENDYDKEVYNGDVGYIEGIDVDTGELTAN
FDGRSVIYEFGELDTLVPAYAATIHKSQGSEYPAVVIPIMTQHYAMLQRNLIYTGVTRGK
KLVVLVGQAKAVAIAVKNVSGRRRWTKLREWLAKPCSSIPPMSVA
NT seq
2118 nt
NT seq
+upstream
nt +downstream
nt
ttgcgcgtgaaggcgcgcggtcatcgcgaccttgtcaccgtcgtcggccacgccgcgacg
atttccgctggggaatggatcacggtcactggcgagtgggtcaacgaccgaaaccatggc
cagcaattcaaggcccggttcctgaaaacatcggccccaacgaccgccgagggaattgag
aaatatctcgcctccgggatgatccggggaatcgggccggcctacgccaagcgcatggtc
aaggcgttcggcgacaaggtcttcgacgtcattgaagccgagcccgatcggctgaaagag
gtcgacggcattggcccgatccgggcccagcgaatcgtttcggcctgggccgaacaaaaa
gtcgtgcgggagatcatggtgttccttcacagtcacggcgtcggcaccgcccgggctgtc
cggatcttcaagacctatggcgccgacgccgtgcaggtgatgacggagaacccctatcgc
ctcgcccgagatattcgcggaatcggcttcaagacggcggacgccatcgccatgaaactc
ggcatcgagaagacggcgatgatccgcgtgcgcgcgggaatttcctacgccctcaccgaa
gccatggacgaaggacactgcgggctgccaatcgacaagctgctgccgctcgcgggagaa
ctcctcgaagtcccccaagagttggttcggacggccttggacctggagcttggcgaaggc
gtcgtcgtgcgagaccaggtagccgagacggattgcgtttttctgaccggcctctaccgc
gcggaacagacgattgcccagcggttgcagactctcctgaacggcaagctgccgtggccg
tggatcgatccaaccaaggccctcccctggatcgagcagaaaaccggtttggcgctggcg
gaacgccagaatgaagccattcgcctggctttgatgacgaaggttctcgtcatcaccggc
ggtccgggcgtcggaaagacaacgatcgtcaactccatcctgcgcattctggcggcgaag
ggcgtcaagcttcttctttgcgcgcccactggccgcgccgcaaagcgcatgacggaggcg
acgggcttcgaggcaaagacgattcaccgcctcctcgaagtcgatccaaaaaatggcggg
ttcaagaagaacgacgacaacccgatcgactgcgaactgctcgtcgtcgacgaagcctcc
atggtcgacgtgatgctgatgcaagcgctgctcaaggccttgcccaatgactctgcattg
ctggttgtcggtgatattgaccagttgccttctatcggccctggacaggtcctcgccgac
atcattcagtctggcgccgttcccgttgtgcgcctgacggaagtatttcggcaggcggcc
cagagccggatcatcctggcggcccataacatcaataaggggatcatgccggatctcagg
cgaccgccaagcgacagcgatttctatttcgtcgcagcggcagagcccgaaaaagccgta
tccacgatcgtcaatctcgttaaacgtcgcataccagaacgttttggttttgatccgatc
cgcgacattcaggttctttgtccgatgaaccgcggcggtgtcggcgctcgctccctgaat
gtcgaactccaatccgtcctgaacccagctggcgaaaagaaagtagagcgatttggttgg
acattcgccccaagggacaaggtgatgcaaatcgaaaatgactatgacaaggaagtctac
aatggcgatgtcggctacatcgagggaatcgatgtcgacacaggagagttgacggcgaac
tttgatggccgctctgtcatctatgaattcggcgaactcgacacgctcgttccggcctat
gccgccaccatccacaagtcccaaggatcggaatatccagctgtcgtgattcccatcatg
acgcagcattatgccatgcttcaacgcaatctgatttacaccggcgtaacccgcgggaag
aaactcgtggtgctggtcggccaagccaaggcggtggcgattgcggtgaagaatgtttcc
ggccgtcggcgctggacaaaacttcgagaatggctcgcgaagccatgctcctcgatcccg
ccgatgagcgtggcctga
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