Methylobacterium sp. CLZ: CLZ_09770
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Entry
CLZ_09770 CDS
T10449
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
mecl Methylobacterium sp. CLZ
Pathway
mecl03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
mecl00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
CLZ_09770
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mecl03021
]
CLZ_09770
03400 DNA repair and recombination proteins [BR:
mecl03400
]
CLZ_09770
Enzymes [BR:
mecl01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
CLZ_09770
Transcription machinery [BR:
mecl03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
CLZ_09770
DNA repair and recombination proteins [BR:
mecl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
CLZ_09770
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
RNA_pol_L_2
Motif
Other DBs
NCBI-ProteinID:
QIJ74843
LinkDB
All DBs
Position
complement(2170017..2171036)
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AA seq
339 aa
AA seq
DB search
MVIQKNWQELIKPNKLQVSAGDDPKRVATVVAEPLERGFGTTLGNSLRRVLLSSLQGAAV
TSVQIDGVLHEFSSIPGVREDVTDIVLNIKTIAIRSQTDQPKRMTLRKTGPGLVTAGDIG
AVGDIQILNPDLVICTLDDGAEIRMEFTVATGKGYVPAERNRPEDAPIGLIPVDALYSPV
TKVSYRVETTREGQDLDKDKLTMTVETNGAVSPEDALAYAARIIQDQLQVFVNFEEPRKE
EAAPLAPQLPFNPALLKKVDELELSVRSANCLKNDNIVYIGDLIQKSEGEMLRTPNFGRK
SLNEIKEVLAGMGLHLGMDVPGWPPENIEDLAKRFEEHY
NT seq
1020 nt
NT seq
+upstream
nt +downstream
nt
gtggtcattcagaagaactggcaagagctcatcaagccgaacaagctgcaggtctccgct
ggcgacgatcccaagcgggtcgccaccgtggttgccgagccgctggagcgcggcttcggc
acgacgctcggcaactcgcttcgccgcgtgctgctctcctcgcttcagggtgccgcggtc
acctcggtgcagatcgacggcgtgctgcacgagttctcgtcgatccccggcgtgcgtgag
gacgtgaccgacatcgtcctcaacatcaagaccatcgccatccgctcgcagaccgaccag
cccaagcgcatgaccctgcgcaagacgggccccggcctcgtcaccgcgggtgacatcggt
gccgtcggcgacatccagatcctgaaccccgacctcgtgatctgcaccctggacgacggg
gccgagatccgcatggagttcaccgtcgccaccggcaagggctacgtcccggccgagcgc
aaccgccccgaggacgcgccgatcggcctgatcccggtcgatgcgctctactccccggtg
accaaggtcagctaccgcgtcgagaccacccgcgagggtcaggatctcgacaaggacaag
ctgaccatgacggtcgagaccaacggcgccgtgtcgccggaggatgcgctggcctatgcc
gcccgcatcatccaggaccagctccaggtgttcgtgaacttcgaggagccccgcaaggaa
gaggccgcgccgctcgcgccgcagctccccttcaacccggccctgctcaagaaggtggac
gagctggagctgtcggtccgttcggcgaactgcctgaagaacgacaacatcgtctatatc
ggcgacctgatccagaagtcggagggcgagatgctgcgcaccccgaacttcggccgcaag
tcgctcaacgagatcaaggaagtgctcgccggcatgggcctgcacctcggcatggacgtt
cccggctggccgccggagaacatcgaggatctcgccaagcgcttcgaagagcactactga
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