Methylobacterium sp. CLZ: CLZ_11410
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Entry
CLZ_11410 CDS
T10449
Name
(GenBank) deoxyribodipyrimidine photolyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
mecl Methylobacterium sp. CLZ
Brite
KEGG Orthology (KO) [BR:
mecl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mecl03400
]
CLZ_11410
Enzymes [BR:
mecl01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
CLZ_11410
DNA repair and recombination proteins [BR:
mecl03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
CLZ_11410
Prokaryotic type
CLZ_11410
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_photolyase
FAD_binding_7
DUF5946
Motif
Other DBs
NCBI-ProteinID:
QIJ75144
LinkDB
All DBs
Position
complement(2511336..2512739)
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AA seq
467 aa
AA seq
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MAIQPARIRVLNDQPPRDRSEYVLYLMQQAMRVPFNPALKRAIEEANRLKLPLLVCFGLL
DGANGFPEANARHYAFLLQGLADAAAALDKRGIAFLVRRGTPAEVAIDLSEEAALLVLDR
GYLAIQKGWYGEIEQKATCRIVQVEGDVVVPVETASTKHEYAARTLRPKLQKLWDGFLEP
LAPREIDHPADGLIARLKQKDGLDVSDPDRLLATLTLDTTVGPVKRFRGGHNEASRRLSR
FLKDAFAGYGAGRNKPEAGAASHMSPYLHFGHISPVEIALAIRAAKHADSDDRSAYLEEL
IVRRELAMNHVFHTQGYDDYDRAVPDWARKTLAEHTDDERPTLCSEQELAEGKTHDHYWN
VAMREMRETGYMHNQLRMYWGKKILEWSPSPEEAFARTLRLNNRYFLDGRDASSFTNVAW
IFGLHDRPWQTRKIFGSVRYQSENSLRKFDAKGYERAVTRLCEAEKN
NT seq
1404 nt
NT seq
+upstream
nt +downstream
nt
atggcgatccaaccggcccgcattcgggtgctgaacgaccaaccgccgcgggatcggtcc
gagtacgtcctgtacctcatgcagcaggccatgcgcgtcccgttcaatccggcgctgaaa
cgggccatcgaggaagccaaccgcctcaaactcccgcttctcgtctgcttcggcctgctc
gacggcgccaacggcttccccgaagccaatgcccgccactacgcctttctgcttcagggg
ctcgccgacgcggcggccgccctggacaagcgcggcatcgccttcctcgtgcgccgggga
acgccggccgaggtcgccattgatctctccgaagaggcggcgctgctggttctcgatcgc
ggctacctcgcgattcagaagggctggtacggcgagatcgaacagaaggcgacgtgccgg
atcgtccaggtcgaaggcgatgtggtggtgccggtcgagaccgcctcgaccaagcacgaa
tacgccgcgcgcacccttcgcccgaagcttcagaagctctgggatggcttcctggagccg
ctggcgccccgcgagatcgaccatccggccgatgggctgatcgcgcgactgaagcagaag
gacgggctcgacgtttcggacccggacaggctgctcgcgacgctgacgctcgacaccacg
gtcggcccagtgaagcgcttccgcggcggccataacgaggcgagcaggcgcctctcccgc
ttcctgaaggacgccttcgccggctacggcgccggccgcaacaagccggaagccggggca
gcctcgcatatgagcccctacctgcatttcgggcacatctcgccggtcgagatcgcgctg
gcgattcgcgcggcgaagcatgccgacagcgacgatcgctcggcctatctcgaggaactg
atcgtccggcgcgaactcgcgatgaaccacgtcttccatacgcagggctacgacgactac
gaccgcgccgtgcccgactgggcccgcaagacgctcgcggagcacaccgacgacgagcgc
ccgacgctctgttccgagcaagagctggcggaggggaagacccacgaccattactggaac
gtcgccatgcgcgagatgcgcgagaccggctacatgcacaaccagttgcgcatgtactgg
ggcaagaagatcctcgaatggtcgccctcgccggaagaggccttcgcccgaacgctgcgg
ctcaacaaccgctacttcctcgacggccgtgacgcgagctccttcaccaacgtcgcctgg
atcttcggcctgcacgaccgcccgtggcaaacgcgcaagattttcgggagcgtgcgctac
cagagcgagaactcgctcaggaagttcgatgcgaagggctacgagcgggccgtgacgcgg
ctgtgcgaggcggagaagaactga
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