Methylobacterium sp. CLZ: CLZ_15270
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Entry
CLZ_15270 CDS
T10449
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
mecl Methylobacterium sp. CLZ
Brite
KEGG Orthology (KO) [BR:
mecl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mecl03032
]
CLZ_15270 (topA)
03400 DNA repair and recombination proteins [BR:
mecl03400
]
CLZ_15270 (topA)
Enzymes [BR:
mecl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
CLZ_15270 (topA)
DNA replication proteins [BR:
mecl03032
]
Prokaryotic type
DNA Topoisomerases
CLZ_15270 (topA)
DNA repair and recombination proteins [BR:
mecl03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
CLZ_15270 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
Zn_ribbon_Top1
Toprim_4
Milton
Motif
Other DBs
NCBI-ProteinID:
QIJ75850
LinkDB
All DBs
Position
complement(3320965..3323670)
Genome browser
AA seq
901 aa
AA seq
DB search
MKVVVVESPAKAKTINKYLGRDYEVLASFGHIRDLPAKDGSVDPEADFAMIWELEDRGSK
RVSEIARAVKGAEKLILATDPDREGEAISWHVIEALTARKALKGIPVERVTFNAITKASV
DAAMRKPREIDQALVDAYLARRALDYLVGFNLSPVLWRKLPGAKSAGRVQSVALRLVVER
EMEIERFKPREYWSIVATLATENGGVFEARLVGADGKRIQRLDVGNAEEAAAFKRDLELA
TFQVASVEAKPAKRHPQPPFTTSTLQQEASRKLGMAPAQTMRVAQRLYEGVDIGGETVGI
ITYMRTDGVDMAPEAIQDARRVIGREFGDDYVPGAPRKYSVKAKNAQEAHEAVRPTDMGR
LPKQVARYLEPEQAKLYELIWTRTIASQMESAELERTTVEVTASVGPRRIDLRATGQVVK
FDGFLALYQEGKDDEEDEDSKRLPAMKAGDSLKRERIASTQHFTEPPPRYSEASLVKRME
ELGIGRPSTYAAVLQTLRDREYVKIEKKRLQPEDKGRLVTGFLESFFKRYVEYDFTASLE
EQLDRVSNAEIDWRTVLRDFWRDFSAAIGGTKELRVAEVLEALNGLLGPHIFPEKADGGD
PRACPTCGSGQLSLKLGKFGAFIGCSNYPECKYTRQLSASGVEGEGDGSSADGGQPGVRV
LGDDPATGLPVTLRDGRFGPFVQLGEASSEKGAEKPKRSSLPKGTTPGSVTLEIALRLLS
LPREVAKHPETGEPILANLGRFGPYVQHGKTYANLGKDDDVLEIGANRAIDLIVAKEQGG
GRGRPSSDPGRALGAHPDGAALVVKAGKYGPYVSDGSVNATLPKTMSAESLTLEQAIDLV
NAKRAAGGGKKPVRKTAARSRAPAKKAEAGEAKKPAARKTATKAAAKPAAAKKAPAKTKA
S
NT seq
2706 nt
NT seq
+upstream
nt +downstream
nt
atgaaagtcgtcgtcgtcgagtcgccggccaaggccaagacgatcaacaaatacctgggg
cgcgattacgaggttctggcctccttcggccatatccgcgatctgccggccaaggacggc
tcggtcgatccggaggccgatttcgccatgatctgggagctggaggatcgcggctcgaag
cgcgtgtccgagatcgcgcgcgccgtaaagggcgccgagaagctgatcctcgccaccgac
ccggatcgcgagggcgaagcgatctcctggcacgtcatcgaggcgctcacggcccgcaag
gcgctcaagggcatcccggtcgagcgggtgaccttcaatgccatcaccaaggcctccgtc
gacgcggcaatgcgcaagccccgcgagatcgatcaggcgctggtcgatgcctatctggcg
cggcgcgcgctcgattacctcgtcggcttcaacctctcgccggtgctgtggcgcaagctg
ccgggcgccaagtccgccggccgggtgcaatcggtcgcgctccgtctcgtggtcgagcgc
gagatggaaatcgagcgcttcaagccccgcgagtactggtcgatcgtcgccacgctcgcg
accgagaacggcggcgtgttcgaggcccgtctcgtcggcgccgacggcaagcgcatccag
cgcctcgatgtcggcaatgccgaggaagcggccgccttcaagcgcgacctcgaactcgcg
accttccaggtggcgagcgtcgaggccaagccggccaagcgccatccgcagccgcccttc
accacctcgacgctccagcaggaggcctcccgcaagctcgggatggccccagcccagacc
atgcgcgtggcgcagcggctctacgagggcgtcgacatcggcggcgagaccgtcggcatc
atcacctacatgcgaaccgacggcgtcgacatggcgccggaggcgatccaggatgcccgc
cgggtgatcggccgcgagttcggcgacgactacgtccccggcgctccgcgcaaatactcg
gtgaaggccaagaacgcccaggaagcgcacgaggccgttcgcccgaccgatatgggccgg
ttgcccaagcaggtcgcccgctatctcgagcctgagcaggccaagctctacgaactgatc
tggacgcgcaccatcgccagccagatggaatcggccgaactggagcgcaccaccgtcgag
gtgaccgcgagcgtcggcccgcgccggatcgacctgcgcgccaccggtcaggtcgtgaag
ttcgacggcttcctcgcgctctaccaggagggcaaggacgacgaggaggacgaggattcc
aagcgtctgccggcgatgaaggcgggcgactccttgaagcgcgagcgcatcgcctcgacc
cagcacttcaccgagccgccgccgcgctattccgaggccagcctcgtcaagcggatggag
gagctcggcatcggccggccctcgacctacgccgcggtgttgcagaccctgcgcgaccgc
gaatacgtcaagatcgagaagaagcgcctccagccggaggacaagggacggctcgtcacc
ggctttctcgagagcttcttcaagcgctacgtcgagtacgatttcaccgcgagcctggag
gagcagctcgaccgggtctcgaatgccgagatcgactggcgcaccgtgctgcgcgacttc
tggcgcgatttttctgccgccatcggcggcaccaaggaattgcgcgtcgcggaagtgctg
gaggcgctgaacggcctgctcgggcctcacatcttccccgagaaggcggatggcggcgat
ccgcgcgcctgcccgacctgcggctccggccagctctcgctcaagctcggcaagttcggc
gccttcatcggctgctcgaactaccccgagtgcaagtacacccgccagctctcggcctct
ggcgtcgagggcgagggtgacggctcctcggccgacggcggccagcccggcgtgcgggtg
ctcggggacgaccccgccaccggcctgcccgtgaccctgcgcgacgggcgtttcgggccg
ttcgtgcaactcggcgaggcgtcgtccgagaagggtgcggagaagcccaagcgctcctca
ctgcccaagggcacgacgccgggcagcgtgaccctggagattgcgctgcgcctgctgtcg
ctgccgcgcgaagtggccaagcatcccgagaccggcgagccgatcctggccaatctcggc
cgcttcggcccctacgtgcagcacgggaagacctacgccaatctcggtaaggacgacgac
gtgctggagatcggcgccaaccgcgccatcgacctcatcgtcgccaaggagcagggcggc
gggcgcgggcgcccctcctccgatcccggccgcgcgctcggtgcgcatccggacggggcc
gccctcgtggtcaaggcgggcaagtacggcccctatgtcagcgacggctcggtcaacgcg
acgctgccgaagacgatgagcgccgagagcctgacgctcgaacaggcaatcgacctcgtc
aacgccaagcgcgccgcgggcggcggcaagaagccggttcgcaagacggcggcccgctct
cgcgcacccgcgaagaaggcggaggccggcgaggcgaagaaacctgccgcgcgcaagacg
gcgaccaaggctgcggccaagccggccgctgcgaagaaggctccggcgaaaacgaaggcg
agctga
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integrated database retrieval system
