KEGG   Methylobacterium sp. CLZ: CLZ_20015
Entry
CLZ_20015         CDS       T10449                                 
Symbol
uvrB
Name
(GenBank) excinuclease ABC subunit UvrB
  KO
K03702  excinuclease ABC subunit B
Organism
mecl  Methylobacterium sp. CLZ
Pathway
mecl03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:mecl00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    CLZ_20015 (uvrB)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:mecl03400]
    CLZ_20015 (uvrB)
DNA repair and recombination proteins [BR:mecl03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     CLZ_20015 (uvrB)
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      CLZ_20015 (uvrB)
SSDB
Motif
Pfam: UvrB_inter UvrB_3rd UvrB Helicase_C ResIII UVR DEAD AAA_30 AAA_22 DUF87 SWI2_SNF2 Microtub_bd Kinesin UB2H DUF2963
Other DBs
NCBI-ProteinID: QIJ76660
LinkDB
Position
complement(4344491..4347256)
AA seq 921 aa
MPAPKNPRVSPAQAPAKATAKTPAKATSNTAAKADKPALIPLDEHLAALLNPALNRNRPK
AVEPVPQPEPARKGRGRKTEAGEAKAYKKIAQDGFAEAPQAGFAIGDAADVDPRLAQALG
LVPPDDGPAPEAGPEADAPSLATEGVSATVEALERLLTEGNPLFKNGEAWVPHRPERPAK
SEGGYKFTLKSEFTPAGDQPRAIAELVAGVKTAERDQVLLGVTGSGKTFTMAKVIEETQR
PALILAPNKTLAAQLYGEFKSFFPDNAVEYFVSYYDYYQPEAYVPRSDTFIEKESSINEQ
IDRMRHSATRALLERDDVIIVASVSCIYGIGSVETYTAMSFTVSLGERIEQRQLIADLVA
LQYKRIQSDFARGTFRVRGDVIELWPAHLEDRGWRIGLFGDEVESIVEFDPLTGKKLNEL
KFVKVYANSHYVTPRPTLQQAIKGIKTELKQRVEELTRMGRLIEAQRLEQRCTFDIEMIE
ATGACNGIENYSRYLTGRKPGEPPPTLFEYLPDNALVFTDESHVTVPQIGGMYRGDFRRK
ATLAEYGFRLPSCLDNRPLRFEEWDAMRPQSIHVSATPAKWEMERTAGVFAEQVIRPTGL
VDPVIEIRPARSQVDDLLGEVRAVAQAGYRTLVTTLTKRMAEDLTEYLHENSVRVRYMHS
DIDTLERIEIIRDLRLGAFDVLIGINLLREGLDIPECALVAILDADKEGFLRSETSLIQT
IGRAARNADARCILYADTITGSMERAMAETERRRTKQLAYNAEHGITPQSVKRGIADILE
SVYERDHVRVDTGLAKDAITVGHNLKAVMADLEKRMRAAAADLDFEEAARLRDELKRLQA
TELMVSDDPMARQGDVEREAGRYGQKGSRIAKPTLDNMGPGTDRELPAGAVPWQERPKAR
STQGLGGQKPRYKGGGGRKRG
NT seq 2766 nt   +upstreamnt  +downstreamnt
atgcccgcacccaagaatccgcgcgtgagcccggcccaagcgcccgccaaggcaacggcc
aaaacaccggccaaggcgacctcgaacacggcggcgaaggccgacaagcccgcgctgata
ccgctcgacgagcatctcgccgcgctgctcaacccggctctcaaccgcaaccgtccgaag
gcggtcgagccggtgcctcagcccgagcccgcccggaagggacgcggccggaagaccgag
gccggcgaggcgaaagcgtataaaaaaatcgcgcaggacggcttcgccgaggcgccgcag
gcgggcttcgccatcggcgatgcggccgacgtcgatccgcgtctggcccaggcgctcggc
ctcgttccgcccgatgacggcccggcgcccgaagccgggcccgaggcggacgcgccgtcg
ctcgcgacagagggcgtctcggccacggtcgaagcgctggaacggctgctcaccgaaggc
aacccgctgttcaagaacggcgaggcctgggtgccgcaccggcccgagcgcccggccaag
tcggagggcggctacaagttcacgctgaaatccgagttcacgccggccggcgaccagccc
agggccatcgccgaattggtggcaggcgtcaaaaccgccgagcgcgatcaggtgctgctc
ggcgtcacgggttcgggaaagaccttcacgatggccaaggtcatcgaggagacgcagcgc
cctgccctgatcctggcgccgaacaagacgctcgccgcgcagctctacggcgagttcaag
agcttctttcccgacaacgcggtcgagtacttcgtctcgtactacgactactatcagccg
gaagcctacgtcccgcgctcggacaccttcatcgagaaggaatcctcgatcaacgagcag
atcgaccggatgcgccactccgccacgcgcgccctgctggagcgggacgatgtgatcatc
gtcgcctcggtctcgtgcatctacggtatcggctcggtcgagacctacacggcgatgtcg
ttcaccgtctcgctcggcgagcggatcgagcagcgccagctcatcgccgacctcgtggcg
ctgcaatacaagcgcatccagtcggactttgcccgcggcaccttccgggtgcgcggcgat
gtgatcgagctgtggccggcccacttggaggatcgcggctggcgcatcggcctattcggc
gacgaagtggaatcgatcgtcgagttcgacccgctgacgggcaagaagctcaacgagctg
aagttcgtgaaggtctacgccaactcgcactacgtcacgccgcgccccaccctccagcag
gcgatcaagggcatcaagaccgagctgaaacagcgcgtcgaggagctgacacgaatgggc
cgcctgatcgaggcgcagcggctggagcagcgctgcaccttcgacatcgagatgatcgag
gcgaccggcgcctgcaacggcatcgagaattattcgcgctacctgacgggccgcaagccc
ggcgagccgccgccgaccctgttcgagtacctgcccgacaacgccctcgtcttcaccgac
gagagccacgtcaccgtgcctcagatcggcggcatgtatcgtggcgacttccggcgcaag
gcgacgctcgccgagtacggcttccgcctgccctcctgcctcgacaaccgccccttgcgg
ttcgaggaatgggacgcgatgcgcccgcaatcgatccacgtctcggccaccccggccaag
tgggagatggagcgcacggccggcgtctttgcagagcaggtgatccgccccaccggcctc
gtcgatccggtgatcgagatccgcccggcgagatcccaggtggacgacctgctcggcgag
gtccgcgcggtggcccaggccggctaccgcacgcttgtgacgacgctgaccaagcgcatg
gccgaggatctgaccgagtacctgcacgagaactcggtgcgggtgcgctacatgcactcc
gacatcgacaccctggagcggatcgagatcattcgcgatctccggctcggcgccttcgat
gtcctgatcggcatcaacctgctgcgcgagggcctcgacatccccgaatgcgcgctggtg
gcgatcctcgacgcggataaggaagggtttctgcgctccgaaacgtcgctgatccagacc
atcggccgcgcggcccgtaacgcggatgcccgctgcatcctctacgcggacaccatcacc
ggctcgatggagcgggcgatggccgagaccgagcgccgccgcaccaagcagctcgcctac
aacgccgagcacggcatcacgccgcaatcggtcaagcgcggcatcgccgacatcctcgag
agcgtgtacgagcgcgaccacgtccgcgtcgatacggggctcgccaaggacgcgatcacc
gtcggccacaacctcaaggccgtcatggccgatctggagaagcggatgcgcgcggccgcc
gccgatctcgacttcgaggaggcagcgcggcttcgcgacgagttgaagcgtctgcaagcc
accgagctgatggtctccgacgatccgatggcgcggcagggcgacgtggagcgcgaggcc
ggccgctacgggcagaagggcagccggatcgcgaagcccaccctcgacaatatgggtccc
ggcacggatcgcgaattgccggccggggccgttccctggcaggagcggccgaaggcccgc
tcgacccaggggttgggcggccagaaaccgcgctacaagggcggcggcgggcgcaagcgc
ggctga

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