Methylosinus sp. C49: MSC49_03100
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Entry
MSC49_03100 CDS
T09855
Symbol
rppH
Name
(GenBank) RNA pyrophosphohydrolase
KO
K08311
putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-]
Organism
mecq
Methylosinus sp. C49
Pathway
mecq03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mecq00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MSC49_03100 (rppH)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mecq03019
]
MSC49_03100 (rppH)
Messenger RNA biogenesis [BR:
mecq03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
MSC49_03100 (rppH)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NUDIX
DUF4945
Motif
Other DBs
NCBI-ProteinID:
BBU60375
LinkDB
All DBs
Position
complement(322077..322580)
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AA seq
167 aa
AA seq
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MEMSELPYRPCVGVMLINAKGLVFLGRRLSKRADPQVIEHEWQMPQGGIDEGEEPLAAAL
RELHEETNVTSVSVLAEAQDWYSYDLPPEAAKRWKGKYRGQTQKWFAFRFEGEEAEIDIE
RPGGGQHEPEFDAWRWERAALLPGLIVPFKRDVYERVVRDFAHLSGD
NT seq
504 nt
NT seq
+upstream
nt +downstream
nt
gtggaaatgagcgagctgccctacagaccctgcgtcggcgtgatgctgatcaacgccaaa
ggcctcgtctttctcggccggcgcctctccaagcgcgccgatccgcaggtgatcgagcat
gaatggcaaatgccgcaaggcggcatagacgagggcgaggagccgctcgccgccgcgctg
cgcgaattgcacgaggagaccaatgtgaccagcgtctccgtgctcgccgaggcgcaggat
tggtacagctacgatctgccgccggaggccgccaagcgctggaaaggcaaatatcgcggc
cagacgcagaaatggttcgctttccgcttcgagggcgaggaagcggagatcgacatagag
cgtcccggcggcggccagcacgagcccgaattcgacgcctggcgctgggagcgcgcggcg
ctattgccgggactgatcgtgcccttcaagcgcgacgtctatgagcgcgtggtgcgcgat
ttcgctcatctctcgggagactga
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