Methylosinus sp. C49: MSC49_05290
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Entry
MSC49_05290 CDS
T09855
Symbol
dnaQ
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
mecq
Methylosinus sp. C49
Pathway
mecq03030
DNA replication
mecq03430
Mismatch repair
mecq03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mecq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
MSC49_05290 (dnaQ)
03430 Mismatch repair
MSC49_05290 (dnaQ)
03440 Homologous recombination
MSC49_05290 (dnaQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mecq03032
]
MSC49_05290 (dnaQ)
03400 DNA repair and recombination proteins [BR:
mecq03400
]
MSC49_05290 (dnaQ)
Enzymes [BR:
mecq01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
MSC49_05290 (dnaQ)
DNA replication proteins [BR:
mecq03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
MSC49_05290 (dnaQ)
DNA repair and recombination proteins [BR:
mecq03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
MSC49_05290 (dnaQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
RNase_H_2
DNA_pol_A_exo1
Motif
Other DBs
NCBI-ProteinID:
BBU60594
LinkDB
All DBs
Position
579537..580277
Genome browser
AA seq
246 aa
AA seq
DB search
MREIVFDTETTGLDPTKGHRIVEIGAVEISNLIPTGRTFHFYLDPERDMPEEAFRVHGLS
SAFLTGQKKFREIADSFLEFVEDANLVAHNAEFDMRFVNFELGQLGKAAIPFDRVVDTLT
IARRRHPGASNTLDALCQRYGVDLTRRDKHGALLDAGLLAEVYAELMGGRQSALILQADA
ATRAEENGGEFLRSRPQKLAPLLTEAERAAHEAFVAKLGKEPMWLRYLAQPETAEPAIET
PMEKRA
NT seq
741 nt
NT seq
+upstream
nt +downstream
nt
atgcgtgagatcgtcttcgacacggagacgaccggtctcgaccccaccaaggggcatcgc
atcgtcgagatcggcgcggtggagatttccaatctcatcccgaccggccgcaccttccat
ttctacctcgatccagaacgcgacatgccggaggaggcgtttcgcgtccatggcctctcc
tcggcctttctgacgggccaaaagaaattccgcgagatcgccgacagctttctggaattc
gtcgaggacgccaatctcgtcgcgcataacgccgaattcgacatgcgcttcgtcaatttc
gagctcggccagctgggaaaagcggcgatccctttcgatcgcgtcgtcgacacactgacc
atcgcgcgccgtcgccatcccggcgcctccaatactctagacgcgctctgccagcgctat
ggcgtcgatctcacgcgccgcgacaagcatggcgctctgctcgacgccggcctgctcgcg
gaagtctatgcggagctgatgggcggccgccaatcggcgctcattctgcaagcggatgcg
gcgactcgggccgaggagaatggcggcgaatttttgcgtagccgcccgcagaagctggcg
ccgctgctcaccgaggcggagcgcgccgcgcatgaggcctttgtcgccaagctgggcaag
gagccgatgtggctgcgctatctcgcgcagccggagacggccgagccggccatcgaaacg
ccgatggaaaagcgagcctga
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