Methylosinus sp. C49: MSC49_06870
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Entry
MSC49_06870 CDS
T09855
Symbol
rpoA
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
mecq
Methylosinus sp. C49
Pathway
mecq03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
mecq00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
MSC49_06870 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mecq03021
]
MSC49_06870 (rpoA)
03400 DNA repair and recombination proteins [BR:
mecq03400
]
MSC49_06870 (rpoA)
Enzymes [BR:
mecq01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
MSC49_06870 (rpoA)
Transcription machinery [BR:
mecq03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
MSC49_06870 (rpoA)
DNA repair and recombination proteins [BR:
mecq03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
MSC49_06870 (rpoA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
RNA_pol_L_2
HHH_XRCC3_RpoA
IDH
Motif
Other DBs
NCBI-ProteinID:
BBU60752
LinkDB
All DBs
Position
complement(748073..749092)
Genome browser
AA seq
339 aa
AA seq
DB search
MSIQKNWQELIKPSKLEVTAGYDPRRIAVAVASPLERGFGLTLGNALRRILLSSLQGAAI
TSIHIDGVLHEFSSIPGVREDVTDIVLNIKDIAIKYSGEGVKRLTLKKLGPGPVTAGDIQ
ATGDLQILNPDLVICTLDEGAEFRVEFTIATGKGYVPADRNRAEDAPIGLIPIDSLYSPV
KKVSYRVENTREGQELDKDKLTLTIETNGAISPEDALAYAARILQDQLSVFVNFEEPRRE
EAAPSIPQLAFNPALLKKVDELELSVRSANCLKNDNIVYIGDLIQKSEAEMLRTPNFGRK
SLNEIKEVLAQMGLHLGMEVPGWPPENIDDLAKRFEEHY
NT seq
1020 nt
NT seq
+upstream
nt +downstream
nt
gtgagcatccagaagaactggcaggaactcatcaagcccagcaagctcgaggtgacggcg
ggttacgatccgcgccgcatcgcggtggccgtcgcttcgccgctcgagcgcggcttcggc
ttgacgttgggcaatgcgctgcgtcgcattctgctctcctccctgcagggcgcggcgatc
acctccatccacatcgatggcgtgctgcacgaattctcgtcgatccccggcgtgcgtgag
gacgtcaccgacattgtcctcaacatcaaggacatcgccatcaaatacagcggcgagggc
gtcaagcgcctgacgctgaagaagctgggtccggggccggtcaccgccggcgacatccag
gccactggcgatctgcagattctcaatcccgatctcgtcatctgcacgctggacgagggc
gccgagttccgcgtggagttcaccatcgcgaccggcaagggctatgtgccggccgaccgc
aaccgcgccgaggacgcgccgatcggcctcatcccgatcgacagcctctattcgccggtc
aagaaggtgagctatcgcgtcgagaacacccgcgagggccaggagctcgacaaggacaag
ctgacgctgacgatcgagaccaatggcgccatctcgccggaagacgcgctcgcctatgcg
gcgcgcattctgcaggatcagctgtcggtgttcgtgaacttcgaggagccgcgccgcgag
gaggccgccccgtccatcccgcagctcgccttcaacccggcgctgctgaagaaggtggac
gagctcgagctctcggtgcgctcggccaactgcctgaagaacgacaatatcgtctatatc
ggcgacctcatccagaagtcggaggcggaaatgctccgcaccccgaacttcggccgcaaa
tccttgaacgagatcaaggaagtgctggcgcaaatgggcctgcacctcggcatggaagtg
cccggctggccgccggagaacatcgacgatctcgccaaaagattcgaagagcattattga
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