Methylosinus sp. C49: MSC49_08340
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Entry
MSC49_08340 CDS
T09855
Name
(GenBank) 3'-5' exonuclease
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
mecq
Methylosinus sp. C49
Brite
KEGG Orthology (KO) [BR:
mecq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mecq03016
]
MSC49_08340
Enzymes [BR:
mecq01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
MSC49_08340
Transfer RNA biogenesis [BR:
mecq03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
MSC49_08340
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
RNase_H_2
Motif
Other DBs
NCBI-ProteinID:
BBU60899
UniProt:
A0A679FBE5
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All DBs
Position
complement(903189..903803)
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AA seq
204 aa
AA seq
DB search
MTIRLHTGDLPDGADLGPVVAIDTETLGLNPHRDRLCLVQLSGGNGDADLVRIAPGQTAA
PNLTRMLADPKVLKLFHFARFDIAILAKTFGVMAEPVYCTKIASKLIRTYTDRHGLKDLV
RELLGVEISKQQQSSDWGAATLSDAQLAYAASDVLYLHALREKLDSMLARESRADLAARC
FEFLPTRARLDLAGWPETDIFSHE
NT seq
615 nt
NT seq
+upstream
nt +downstream
nt
atgaccatccgcctgcatacgggcgacctgccggacggcgccgatctcggccccgtcgtc
gccatagacacggaaacgctcggcctcaatccgcatcgcgaccggctctgcctcgtccag
ctctccggcggcaatggcgacgccgatctcgtgcgcatcgcgccgggccagaccgcggcg
cccaatctgacgcgcatgctcgccgatccgaaggtgctgaagctcttccatttcgcgcgt
ttcgacatcgccattctggccaagaccttcggcgtgatggcggagccggtctattgcacc
aagatcgcctccaagctcatccgcacctacacggatcgccatgggctgaaggatctcgtg
cgcgaattgctcggcgtggaaatctccaagcagcagcaatcctccgactggggcgcggcg
acgctctcggacgcgcagctcgcctatgcggcctcggacgtgctctatctccatgcgctg
cgcgagaagctcgactccatgctggcgcgcgagagccgcgccgatctcgccgcccgctgc
ttcgagtttctgccgacgcgcgcgcggctcgatctcgcgggctggccggagaccgatatt
ttctcgcatgaatga
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