Methylosinus sp. C49: MSC49_11770
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Entry
MSC49_11770 CDS
T09855
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
mecq
Methylosinus sp. C49
Pathway
mecq03030
DNA replication
mecq03410
Base excision repair
mecq03420
Nucleotide excision repair
mecq03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mecq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
MSC49_11770 (polA)
03410 Base excision repair
MSC49_11770 (polA)
03420 Nucleotide excision repair
MSC49_11770 (polA)
03440 Homologous recombination
MSC49_11770 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mecq03032
]
MSC49_11770 (polA)
03400 DNA repair and recombination proteins [BR:
mecq03400
]
MSC49_11770 (polA)
Enzymes [BR:
mecq01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
MSC49_11770 (polA)
DNA replication proteins [BR:
mecq03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
MSC49_11770 (polA)
DNA repair and recombination proteins [BR:
mecq03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
MSC49_11770 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
MSC49_11770 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
Taq-exonuc
Motif
Other DBs
NCBI-ProteinID:
BBU61242
UniProt:
A0A679F6H5
LinkDB
All DBs
Position
complement(1242917..1245904)
Genome browser
AA seq
995 aa
AA seq
DB search
MTLTHKPVGPDSRVFLVDGSSFVFRAYFQSIRQDAKYNYRTDRLPTGAVRLFCAKLFQFI
REGAADLTPTHLAIIFDKSENSFRKEIYPDYKAHRQDPPDDLIPQFPLMRAAVRAFGLLP
IEQDVYEADDLIATYAKQARARGADVLIVSADKDLMQLIDDKVSMYDPASGAREERRIGV
AEVVDYFGVPPSRVVDVQALAGDSTDNVPGAKGIGVKTAAQLINEYGDLDTLLARAGEIK
QPKRRETLTDPASVALIRTSQKLVKLVDDAPLEIPLDDLGLHQPDGKTLVAFLQAMEFTQ
LTRRAAETYGVEANEIEPDPAFVGPAGWRGRNGEVAETPALPAPEAAAPGAPAAPTGEKG
ALSPAALAEARREQGVATKIDRSLYETVTTLERLDAWIAEAFSIGVVAMDTETTSLDPMS
CDLVGVSLATAPGRACYIPLQHVAPTGADLLGGDPPPVQIPFAEALARLKPLLEARGVLK
IAHNMKYDLLVLACCGIDVAPIEDTMLISYVLDAGRNNHGLDELSKKHLGHECIPFSAVA
GSGRTFIGFARVPLDKATEYAAEDSDVALRLWRALRPRLAAEHMTSVYETLERPMVSVLA
KMERRGIAIDRNILSRLSGEFAQDMARLEAEIHELAGESFNLGSPKQLGDILFGKMGLPG
AKKTATGAWSTSASVLDELAESGNTFAARILDWRQLSKLKSTYTDALPTFVNKTTHRVHT
SYALAATTTGRLSSSDPNLQNIPVRNEAGRKIRTAFVAERGNVLISADYSQIELRLLAHI
ADIPQLRQAFADGIDIHAMTASEMFGVPVQGMPSEVRRRAKAINFGIIYGISAFGLANQL
SIPREEAAAYIKRYFERFPGIRAYMDKTRKAVRENGLVTTIFGRKCHFPRIGSSNASERA
FFERAAINAPIQGAAADIIRRAMARMDEALAHEKLSARMLLQVHDELVFEAPKEEAEATI
RIVKRVMEEAPHPAVTLSVPLEVEARAAQNWDEAH
NT seq
2988 nt
NT seq
+upstream
nt +downstream
nt
atgactctcacacataagcccgtcggtcccgacagccgcgtctttctcgtcgacggctcg
tccttcgtctttcgcgcctatttccagtcgatacggcaggacgcgaaatataattatcgc
acggaccgcctcccgaccggcgcggtgcggctgttctgcgccaagctgtttcagttcatc
cgcgagggcgcggccgatctcacgccgacgcatctcgctatcatcttcgacaaatcggag
aactccttccgcaaggagatctacccggactacaaggcgcatcgtcaggatccgcccgac
gatctcattccgcaatttccgctgatgcgcgcggccgtgcgcgccttcggcctgctgccg
atcgagcaggacgtctatgaggcggacgatctcatcgccacttacgctaagcaagcgcgc
gcgcgcggcgccgatgtgctgattgtctccgccgacaaggatctgatgcagctcatcgac
gataaagtgtcgatgtatgatccggcttcaggcgcgcgcgaggagcggcgcatcggcgtc
gccgaggtggtcgattatttcggcgtgccgccttcgagagtcgtcgatgttcaggcgctc
gctggcgattccaccgataatgtgccgggcgccaagggcattggcgtgaaaaccgccgcg
cagctcatcaatgaatatggcgatctcgacacgctgctggcgcgcgccggcgagatcaag
cagcccaagcgccgcgagacgctgaccgatcctgcgagcgtcgcgctcatccgcacgtca
cagaagctggtgaagctcgtcgatgacgcgccgctggagattccgctggacgatctcggc
ctgcatcagccggacggcaagacgctggtcgcctttctgcaggcgatggagttcacgcag
ctcacgcgtcgcgccgcggagacctatggcgtcgaggcgaatgagatcgagccggacccg
gccttcgtcggcccggcgggatggcgcggccgcaatggcgaggtcgccgagacgcccgcc
ctgcccgcgccggaggccgcagcgccgggcgcgcccgcagctcccacgggagagaagggc
gcgctctcgccggccgcgctcgccgaggcgcggcgcgagcaaggcgtcgcgaccaagatc
gatcgctcgctctatgagacggtgacgacgctcgagcggctcgacgcctggatcgcggaa
gctttttccatcggcgtcgtcgccatggatacggagacgacctcgctcgatcccatgtcc
tgcgatctcgtcggcgtctcgctggcgacggcgcccggacgcgcctgctatattccgctg
cagcatgtcgcgcccaccggcgccgatctgctcggcggcgatccgccgcccgtgcaaatt
ccctttgcggaagcgctcgcgcgcttgaagccgctattggaagcgcgcggcgtgctgaag
atcgcgcataatatgaaatatgatctcctcgttctggcctgctgcggcatcgatgtcgcg
ccgatcgaggacacgatgctgatctcttatgtgctcgacgccggccgcaataatcacggc
ctcgacgagctttcgaagaagcatctcggccacgaatgcattcccttctccgccgtcgcc
ggctccggccgcacattcatcggcttcgcgcgcgtgccgctcgacaaagcgaccgaatat
gcggcggaagattccgatgtcgcgctgcgtctgtggcgcgcgctgaggccgcgccttgcc
gccgagcatatgaccagcgtctatgagacgctggagcgcccgatggtgagcgtgctcgcc
aaaatggagcggcgcggaatcgccatcgatcgcaatattctttcgcgcctctccggcgaa
ttcgcgcaggatatggcgcggctcgaggccgagattcacgagctcgccggcgagagcttc
aatctcggctcgcccaagcaattgggcgatattctcttcggcaagatgggcctgcccggc
gccaagaagaccgcgaccggcgcctggtccacgtcagccagcgtgctcgacgaattggcc
gagagcggcaatacattcgccgcgcgcatattggattggcgacagctctccaagctcaaa
tccacttacacggatgcgctgcccactttcgtgaacaagacgacgcatcgcgtccacaca
tcttacgcgctcgccgcgacgacgacggggcggctctcgtcgtccgaccccaatctgcag
aacatccctgtgcgcaacgaggctgggcgcaagattcgcacggccttcgtcgccgaacgc
ggcaatgtgctcatctcggcggattattcgcagatcgaattgcgcctgctcgcgcatatc
gccgatattccgcaattgcggcaggccttcgccgatggaatcgacattcacgcgatgacg
gcgagcgagatgttcggcgtgccggtgcagggcatgccgtcagaggtgcgccgccgcgcc
aaggcgatcaatttcggcatcatctatggcatttccgccttcggcctcgccaatcagctc
tccattccgcgcgaggaggcggccgcctatatcaagcgctatttcgagcgcttccccggc
attcgcgcctatatggacaagacgcgcaaggccgtgcgggagaacggcctcgtcaccacc
attttcggccgcaaatgccatttcccgcgcatcggctcctctaacgcctcggagcgcgct
ttcttcgagcgcgcggcgatcaatgcgccgatccaaggcgcggccgccgacatcatccgc
cgcgccatggcgcgcatggacgaggccctcgcgcatgagaagctcagcgcgcgcatgctg
ctgcaagtgcatgatgagctggtgttcgaggcgccgaaggaagaggccgaggcgacgatc
cgcatcgtcaagcgcgtgatggaagaggcgccgcatccggcggtgacgctctccgtgccg
ctggaagtggaagcccgcgccgcgcagaattgggacgaggcgcattga
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integrated database retrieval system
