Methylosinus sp. C49: MSC49_14200
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Entry
MSC49_14200 CDS
T09855
Name
(GenBank) exodeoxyribonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
mecq
Methylosinus sp. C49
Pathway
mecq03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
mecq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
MSC49_14200
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mecq03400
]
MSC49_14200
Enzymes [BR:
mecq01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
MSC49_14200
DNA repair and recombination proteins [BR:
mecq03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
MSC49_14200
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
DIRC1
Motif
Other DBs
NCBI-ProteinID:
BBU61485
LinkDB
All DBs
Position
complement(1508513..1509289)
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AA seq
258 aa
AA seq
DB search
MRIATWNVNSVRQRLEPLTAYLREVAPDVLCLQEIKCEDKAFPRAEIEDLGYNVETHGQK
TFNGVAILSKTPIEVVRGLPKFEHDPQARYIEAVVSTDHGALRVASIYLPNGNPPDTEKY
AYKLAFMDCLIAHAASLLALEEPVVLAGDYNVIPAAGDVHDPKAWAGDALFLPQTRAKFQ
ELLNLGYTEALRASTDAAGLYTFWDYQAGAWQKNNGIRIDHLLLSPQAADRLQSVTIDKE
LRAGAKPSDHVPIRCELE
NT seq
777 nt
NT seq
+upstream
nt +downstream
nt
ttgcgcatcgccacttggaacgtcaattccgtccgccagcggctggagccgctcaccgcc
tatctgcgcgaggtcgcgccggacgtattgtgcctgcaagagatcaaatgcgaggacaag
gccttcccgcgcgcggagatcgaggatctcggctataatgtcgagacgcatgggcagaag
acattcaacggcgtcgccattctctccaagacgccgatagaagtggtgcgcggcctgccg
aaattcgagcatgatccgcaggcgcgctacatagaggccgtcgtctccaccgatcatggc
gcgctgcgcgtcgccagcatctatctgcccaatggcaatccgccggacacggagaaatac
gcctataagctcgccttcatggactgcctcatcgcccatgcggcgagccttctggcgctc
gaggagccggtggttctggccggcgactacaatgtcattcccgcggccggcgacgttcac
gacccgaaagcctgggctggcgacgcgctgttcctgccgcagacgcgggccaaattccaa
gagctgctgaacctcggctatacggaggcgctgcgcgcctccaccgacgccgccgggctc
tacacattctgggattatcaggccggcgcctggcagaagaacaatggcattcgcatcgac
catcttctgctctcgccgcaggccgccgatcgcttgcagagcgtgaccatcgacaaggag
ctgcgcgccggcgcaaagccctccgaccatgtgccgatcagatgcgagctggaatga
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