Methylosinus sp. C49: MSC49_22150
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Entry
MSC49_22150 CDS
T09855
Symbol
topA
Name
(GenBank) DNA topoisomerase 1
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
mecq
Methylosinus sp. C49
Brite
KEGG Orthology (KO) [BR:
mecq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mecq03032
]
MSC49_22150 (topA)
03400 DNA repair and recombination proteins [BR:
mecq03400
]
MSC49_22150 (topA)
Enzymes [BR:
mecq01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
MSC49_22150 (topA)
DNA replication proteins [BR:
mecq03032
]
Prokaryotic type
DNA Topoisomerases
MSC49_22150 (topA)
DNA repair and recombination proteins [BR:
mecq03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
MSC49_22150 (topA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
Zn_ribbon_Top1
Toprim_4
KARI_N
Motif
Other DBs
NCBI-ProteinID:
BBU62280
LinkDB
All DBs
Position
complement(2364005..2367025)
Genome browser
AA seq
1006 aa
AA seq
DB search
MPMFAPRRGPGSPAKPSGEPPATGFLKDCSMNVVIVESAAKAQTINKYLGRDFNVIACYG
HVRDLPPKDGSVDPAEDFAMKWESDAKSAKRISAIADAVKSADTVILATDPDREGEAISW
HLLDILKKKKALGGKRVERVVFNAVTKDAIKQAMAHPREIDQALVDAYLARRALDYLVGF
TLSPVLWRKLPGARSAGRVQSVALRLVCDRELEIEKFVTREYWSLVAHLKTKAGEPFTAR
LSGADGKKITRLDIGSGQEAEDFKKALETAAFTIRSVEAKPVKRHPYAPFTTSTLQQEAS
RKLGLAPAQTMRIAQRLYEGVDIGGETAGLITYMRTDGVDMAPEAIASARNVIASEYGDR
FVPKVPRKYTVKAKNAQEAHEAIRPTDLSRLPKHVAKHLEPEQAKLYELIWTRTIASQME
SAELERTTVDIDALVGKRSLELRASGQVVRFSGFLELYQEGRDDDQDEDGGRLPAMQPGE
PATREKIEAGQHFTEPPPRYTEATLVKRMEELGIGRPSTYASTLAVLRERDYVRLDKKRL
VPEDKGRIVTAFLESFFTRYVEFDFTAGLEEKLDKVSNNEIDWKEVLRDFWADFSGAVDG
TKELRTTQVLDSLNDLLGPHIFPAKPDGSDPRACPACSAGQLSLKLGKYGAFIGCSNYPE
CRFTRTLSPPTGEAAEGARPGVKVLGQDPESGAEITLRGGRFGDYVQEGEATEEGEKPKR
SSIPKSIKSDELTLEQAIRLLSLPREVAKHPESGEPIVAGIGRFGPYVQHGKTYANIGRD
DDILTIGGNRAIDLIVTKESGGGGSRFGRASDPGRALGDHPQGGAISVKSGRFGPYVNWG
KVNATLPKGTDPDSLTVQQAVDLLAAKASGAPSGGGRVLGEHPQGGAITLRDGRYGPYVN
LGKVNATLPKNMSPEDVTLEEAIRLIEEKGGPVKAKKAPAKKAPAAKAKAPASKAPAKKA
PAKKAAAKKDIEESDEVPFEDSKPAKKAAAAKAPAKKPTKKAASGK
NT seq
3021 nt
NT seq
+upstream
nt +downstream
nt
ttgcccatgttcgcgccccgacgcgggccgggctccccggcgaagccaagcggcgagccg
cccgcgaccggatttctgaaggactgctcgatgaatgtcgtcatcgtcgaatcggccgcc
aaggcccagacgatcaacaaatatctcggccgcgatttcaatgtgatcgcctgctacggc
catgtgcgcgacctgcctcccaaggacggctccgtcgatccggccgaagatttcgcgatg
aaatgggagagcgacgccaaatcggccaagcgcatttccgccatagcggacgccgtgaag
agcgccgacacagtcattctggccaccgaccccgatcgcgagggcgaggccatctcctgg
catttgctcgacatattgaagaagaagaaggcgctcggcggcaagcgcgtcgagcgcgtc
gtcttcaacgccgtcaccaaggacgcgatcaagcaggctatggcgcatccgcgcgagatc
gaccaggcgctggtcgacgcctatctcgcccgccgggcgctggattatctcgtcggcttc
accctttccccggtgctgtggcgcaaattgccgggcgcgcgctcggcaggccgcgtgcaa
tcggtggcgctgcgcctcgtctgcgaccgcgagctggagatcgagaaattcgtcacccgc
gaatattggtcgctggtcgcgcatttgaaaaccaaggccggcgagcccttcaccgcccgc
ctctcgggcgccgacggcaagaagatcacccgcctcgacatcggctccggccaggaggcc
gaggacttcaaaaaggcgctggagaccgccgccttcaccattcgctcggtggaggcgaag
ccggtcaagcggcacccttacgcgcccttcaccacatcgactcttcagcaggaggcctcg
cgcaagctcggcctcgcgccggcgcagaccatgcgcatcgcgcagcgcctctatgagggc
gtcgacataggcggcgagaccgccggcctcatcacctatatgcgaaccgacggcgtcgat
atggcgccggaggccatcgcctctgcgcgcaatgtgatcgcttcagaatatggcgatcgc
ttcgtgccgaaggttccgcgcaaatatacggtaaaggccaagaacgcccaggaagcgcat
gaggcgatccggccgaccgacctctcgcgtctgcccaagcatgtcgccaagcatttggag
ccggagcaggccaagctctatgagctgatctggacgcgcaccatcgccagccagatggaa
tcggccgagctggagcgcaccacggtcgatatcgacgccctcgtcggcaagcggagcctc
gagctgcgcgcctccggccaggtggtgcgtttctcgggctttctcgagctctatcaggaa
ggccgcgacgacgatcaggacgaggacggcggccgcctgccggcgatgcagcccggcgag
ccagcgacgcgcgagaagatcgaggccggccagcatttcaccgagccgccgccgcgctac
accgaggcgacgctggtgaagcgcatggaggagctcggcatcggccgcccctcgacctac
gcctcgacgctcgccgtgctgcgcgagcgcgactatgtgcgtctcgacaagaagcgcctc
gtccccgaggacaagggccgcatcgtgacggcctttctggagagcttcttcacccgctat
gtggagttcgacttcaccgccggcctcgaggagaagctcgacaaggtctccaacaacgag
atcgactggaaagaggtgctgcgcgatttctgggccgacttctccggcgcggtcgacggc
accaaagagctgcgcaccactcaggtgctcgacagcctcaatgatctcttggggccgcat
attttccctgccaagcccgacggctccgatccgcgcgcctgcccggcctgcagcgccggc
caattgtcgttgaagctcggcaaatatggcgccttcatcggctgctccaactatcccgaa
tgccgcttcacccgcacgctttcgccgccgaccggcgaggcggcggaaggcgcgcgtccc
ggcgtgaaggttctgggccaggacccggagagcggcgccgagatcactctgcgcggcggc
cgcttcggcgactatgtgcaggagggcgaggcgaccgaggagggcgagaagcccaagcgc
tcctccatccccaagagcataaaatccgacgagctgaccctcgagcaggcgatccggctg
ctgtccctgccgcgcgaggtagccaagcatccagagagcggcgagccgatcgtcgccggc
atcggccgcttcgggccttacgtccaacacgggaagacctacgccaatatcggccgcgac
gatgatattctgacgatcggcggcaatcgcgccatcgatctcatcgtcaccaaggagagc
ggcggcggcggctcgcgcttcggccgcgcctccgaccccggccgcgcgctcggcgaccat
ccgcagggcggcgcgatctcggtgaagagcgggcgcttcggaccctatgtgaactggggc
aaggtcaacgccaccctgcccaagggaaccgatcccgacagcctgactgtgcagcaggcg
gtcgatcttctggccgccaaggcgagcggcgcgccctctggcggcggccgcgtgctcggc
gagcatccgcagggcggcgcgatcacgctgcgcgacggccgctatgggccttatgtgaat
ctcggcaaggtcaacgccactctgccgaagaatatgagcccggaggatgtgacgctggaa
gaggcgatccgcctgatcgaggagaagggcggcccggtcaaggccaagaaggcgccggcg
aaaaaggcccccgccgccaaggccaaagcgcccgcctccaaggctccagcgaaaaaggct
ccggcgaaaaaagccgccgccaagaaggacattgaagagagcgacgaggttcctttcgag
gattcgaagccggcgaaaaaagcggccgccgccaaggcgccggccaagaagcccacgaaa
aaggccgcctcggggaagtga
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