Methylosinus sp. C49: MSC49_24320
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Entry
MSC49_24320 CDS
T09855
Symbol
hfq
Name
(GenBank) RNA-binding protein Hfq
KO
K03666
host factor-I protein
Organism
mecq
Methylosinus sp. C49
Pathway
mecq02024
Quorum sensing
mecq03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mecq00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MSC49_24320 (hfq)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
MSC49_24320 (hfq)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mecq03019
]
MSC49_24320 (hfq)
03036 Chromosome and associated proteins [BR:
mecq03036
]
MSC49_24320 (hfq)
Messenger RNA biogenesis [BR:
mecq03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
MSC49_24320 (hfq)
Chromosome and associated proteins [BR:
mecq03036
]
Prokaryotic type
Nucleoid associated proteins
Other nucleoid associated proteins
MSC49_24320 (hfq)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hfq
Hfq_1
Motif
Other DBs
NCBI-ProteinID:
BBU62497
LinkDB
All DBs
Position
complement(2592825..2593094)
Genome browser
AA seq
89 aa
AA seq
DB search
MSSERAQNLQDTFLNYVRKNKVPLTIFLVNGVKLQGIVTWFDNFCLLLRRDGHSQLVYKH
AISTIMPGHPIHMFEPGEEGEQSPPERHR
NT seq
270 nt
NT seq
+upstream
nt +downstream
nt
atgtcctccgaacgcgcgcaaaatctgcaagatacgtttttgaattacgtgcggaagaac
aaagtcccactcacgatttttctggtcaatggcgtcaaattgcagggcatcgtgacctgg
ttcgacaatttctgcctcttgctgcggcgcgatgggcattcccagctcgtctataagcat
gcgatctcgacgatcatgcccggccatccgatccatatgttcgagccgggcgaggagggc
gagcagagcccgccggagcgccatcgctga
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integrated database retrieval system