Methylosinus sp. C49: MSC49_24480
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Entry
MSC49_24480 CDS
T09855
Symbol
dnaE
Name
(GenBank) DNA-directed DNA polymerase
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
mecq
Methylosinus sp. C49
Pathway
mecq03030
DNA replication
mecq03430
Mismatch repair
mecq03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mecq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
MSC49_24480 (dnaE)
03430 Mismatch repair
MSC49_24480 (dnaE)
03440 Homologous recombination
MSC49_24480 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mecq03032
]
MSC49_24480 (dnaE)
03400 DNA repair and recombination proteins [BR:
mecq03400
]
MSC49_24480 (dnaE)
Enzymes [BR:
mecq01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
MSC49_24480 (dnaE)
DNA replication proteins [BR:
mecq03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
MSC49_24480 (dnaE)
DNA repair and recombination proteins [BR:
mecq03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
MSC49_24480 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
T2SSK
HHH_3
HROB
Motif
Other DBs
NCBI-ProteinID:
BBU62513
UniProt:
A0A679F4X5
LinkDB
All DBs
Position
complement(2610570..2614037)
Genome browser
AA seq
1155 aa
AA seq
DB search
MSAIDAVGFVHLHVHTAFSLREGALTLSRVIDLAQKDQMPALAVTDTDNLFGALEFSEKA
AKVGVQPIPGVQLNVDFGDGSQSAAGGSDGRGHIVLIAQSELGYSNLMRLASRAYLEPEQ
GEASHVSLASLAESCEGLIALTGGSEGGLDTLFSKGRAEQALARLEALLPLFDNRLYVEI
QRHGLETQRRVEPQLLDVAYRRGLPLVATNEPFFATAADFEAHDALLCIAEGTVTSVAER
RRLSPQHYFKTRKEMLALFADLREATDSTVEIARRAAFRPLTRKPIMPRFMLDGEGGGES
LEDIEARELRRQAKEGLEARLLVQPPAPGQTRETYDARLEFELDTIEKMRFPGYFLIVSD
FIKYAKSQGIPVGPGRGSGAGSLVAYALTITDLDPLRFGLFFERFLNPERMSMPDFDIDF
CQTRRGEVIDYVRERYGAEKVAQIITFGSFLARGVLRSVGRVLEMPLGQVDKLAKLVPQN
PAKPVTLAEAVSGEQKLREAIDEDEKVARLFKIAGALEGLYSNASTHAAGVVIGDRPLDA
LVPLYRDPKSDMPATQFNMKWVEPAGLIKFDFLGLKTLTVLATAVDLVRRRAPDFDLAGI
PLDDSETYEMLGRGETVGVFQLESAGMRKALVEMHADHFEDIIALVALYRPGPMANIPTY
CAVKLGDEEPDYIHPKIEHILKETFGVIIYQEQVMQIAQVLSGYSLGEADLLRRAMGKKI
KAEMDAQRERFVTGATERGLTAQKASDIFDLLAKFADYGFNKSHAAAYALIAYQTAWFKA
HYPVEFLAASMTLDKGNTDKLAEFRNEARRLGIAVEPPSIRRSGVDFDVAPGADGKLAIR
YALSAVKGVGEGQAESIVRTRGGAPFRSLSEFARRINPREVNKKVLENLACCGAFDEVDA
DRARVVGAIETVLACANRCAEDRQAGQNALFGGAEAEEELVLPKSQPWTASEKLKREFDA
AGFFLSGHPLDAYASVLGRLRLTRWAEFIIAVKRGASAGRLAAVVLDRAERRTKSGSKMG
VVQLSDDSGQYEAILFQEGLNQYRDLLEKGATVLVTLSAALEGEDVRARITEVQPLAAAA
AKAQKGLRIFLQDAAPLDALKSRLATRGEGEVSIVVALERMASEVEIKLPGGYSVSADVA
GALKTIPGVLAVEHV
NT seq
3468 nt
NT seq
+upstream
nt +downstream
nt
atgagcgcgatcgacgcggtcggcttcgttcatctacatgtccacaccgctttctcgcta
cgcgagggcgcgctgaccctctcgcgggtcatcgatctggcccagaaagaccagatgccg
gcgctggccgtcaccgacaccgataatctcttcggcgcgctggagttttcggaaaaggcc
gccaaggtcggcgtgcagccgatccctggcgtgcagctcaatgtcgatttcggcgacggg
tcgcagagcgcggcgggtggttccgatgggcgcggccatatcgtgctgatcgcgcagtcg
gagttgggctattccaatctgatgcggctcgcctcgcgcgcctatctcgagccggagcag
ggcgaagcctcccatgtctcgttggcgagcctcgcggaaagctgcgaggggctgatcgcc
ctcacaggcggctcggaaggcgggctcgacacgctcttctccaagggcagggcggagcag
gcgctcgcccgcctcgaggcgctgctgccgctcttcgacaaccggctctatgtcgagatc
cagcgtcacggcctcgagacgcagcggcgcgtcgagccgcaattgctcgatgtcgcctat
cggcgcggcctgcctctggtcgccaccaatgagccctttttcgcgacggcggcggatttc
gaggcgcatgacgcgctgctctgcatcgccgagggcacagtgaccagcgtcgccgagcgc
cggcggctctcgccgcagcattatttcaagacgcgcaaggagatgctcgcgctcttcgcc
gatctccgcgaggcgacggattcgacggtcgagatcgctcgccgtgcggccttccgcccg
ctgacgcgcaagcccatcatgccgcgcttcatgctggacggggaaggaggcggggagtcg
ctcgaggatatagaggcgcgcgagttgcgccggcaggcgaaggagggcctcgaggcgcgc
ctcctcgtccagccgcccgcgccggggcagacgcgcgagacctatgacgcgcgcctcgaa
ttcgagctcgacacgatcgagaagatgcgcttccccggttactttctgatcgtctcggac
ttcatcaaatatgcgaaatcacaagggattccggtcgggccggggcgcggctcgggcgcg
ggctcgctggtcgcctatgcgctgaccatcaccgatctcgatcctctgcgcttcggcctc
ttcttcgagcgcttcctcaatccagaacgcatgtcgatgccggatttcgacatcgacttc
tgccagacgcggcgcggcgaggtcatcgactatgtccgcgagcgctatggagccgagaag
gtggcgcagatcatcaccttcggctcgttcctcgcgcgcggcgtgctgcgcagcgtcggc
cgcgtgctggaaatgccgctgggacaggtcgacaagctcgccaagctggtgccgcagaac
ccggcgaagccggtgactttggccgaggccgtctccggcgagcagaaattgcgcgaggcg
atcgacgaggacgagaaggtcgcgcgcctgttcaagatcgctggcgcgctcgaggggctc
tattccaacgcctcgacccatgccgccggcgtcgtcatcggagaccggccgctcgacgcg
ctggtgccgctctatcgcgatcccaaatccgatatgccggccacccagttcaacatgaaa
tgggtggagccggccggcctcatcaaattcgacttcctcggcctcaagacgctgaccgtg
ctggccaccgccgtcgatctggtgcgccggcgcgcgccggatttcgatctcgcgggcatc
ccgctcgacgattccgagacttacgaaatgctcgggcgcggcgagacggtgggcgtgttc
cagctggaaagcgcgggcatgcgcaaggcgctggtcgagatgcacgccgaccatttcgag
gacatcatcgctctcgtcgccctctaccggccgggcccgatggccaatatcccgacctat
tgcgcggtgaagctcggcgatgaggagcccgattacatccaccccaagatcgagcacatc
ttaaaggagacgttcggcgtcatcatctaccaggagcaggtgatgcagatcgctcaggtg
ctctccggctattcgctgggcgaggccgatctgctccgccgcgccatgggcaagaagatc
aaggccgagatggacgcccagcgcgagcgcttcgtcaccggcgcgacagagcgcgggctc
acggcgcaaaaggccagcgatatcttcgacctgctggcgaaattcgccgattacggcttc
aacaagagccatgcggcggcctatgcgctgatcgcctaccagaccgcctggttcaaggcg
cattatccggtcgagtttttggcggcctccatgacgctcgacaagggcaacaccgacaag
ctcgccgaattccgcaatgaggcgcggcggctcggcattgcggtcgagccgccttctatc
cgccgctcgggcgtcgatttcgacgtcgcgcccggcgccgacggcaagctcgccattcgc
tatgcgctctccgccgtgaagggcgtcggcgaggggcaggccgagtcgatcgtgcggacg
cgcggcggcgcgcctttccgcagcctctcggagttcgcgcggcggatcaatccgcgcgag
gtcaataagaaggtgctggagaatctcgcttgctgcggcgccttcgacgaggtcgacgcc
gaccgcgcccgcgtcgtcggcgcgatcgagactgtgctcgcttgcgccaatcgctgcgcc
gaggaccggcaggcggggcagaatgcgctgttcggcggcgcggaggcggaggaggagcta
gtcctgccgaagagccagccttggacggcgtccgagaagctgaagcgcgaattcgacgcc
gccggcttctttctctccggccatccgctcgacgcctatgcgagcgtgctcggccggctg
cggctgacgcgctgggcggagttcatcatagcggtgaagcgcggcgccagcgccgggcgg
ctcgccgcggtggtgctcgaccgcgccgagcggcgcaccaaatccggctccaaaatgggc
gtggtccagctctcggacgacagcgggcaatatgaggcgatcctgtttcaggagggcctc
aaccaatatcgcgaccttttggagaagggcgcgaccgtgctggtgacgctctccgccgcg
ctcgagggcgaggatgtgcgtgcgcgcatcaccgaggtgcagccgctcgcggccgctgcg
gcgaaggcgcaaaaagggctgcgcatcttccttcaggacgccgcgccgctcgacgcgctg
aagtcgcggctggcgacgcgcggcgagggcgaagtgtcgatcgtcgtagcgctggagcgc
atggcgagcgaggtggagatcaagctgccgggcggatattcggtctcggccgatgtcgcc
ggggcgctgaagacgatccccggcgtgctcgccgtggagcatgtgtga
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