Methylosinus sp. C49: MSC49_29540
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Entry
MSC49_29540 CDS
T09855
Symbol
uvrB
Name
(GenBank) UvrABC system protein B
KO
K03702
excinuclease ABC subunit B
Organism
mecq
Methylosinus sp. C49
Pathway
mecq03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
mecq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
MSC49_29540 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mecq03400
]
MSC49_29540 (uvrB)
DNA repair and recombination proteins [BR:
mecq03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
MSC49_29540 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
MSC49_29540 (uvrB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
UvrB
Helicase_C
ResIII
UVR
DEAD
AAA_22
UB2H
AAA_30
DUF2963
Kinesin
SWI2_SNF2
Microtub_bd
DUF87
DUF3772
Motif
Other DBs
NCBI-ProteinID:
BBU63019
LinkDB
All DBs
Position
complement(3140229..3142748)
Genome browser
AA seq
839 aa
AA seq
DB search
MASPPKKPKNPAKPTRAKAAKPEVSPIAPHLQALLNPGLAERQAGFEEAPQAAYDAGAVD
GELVERLDLGGAGGVSATMESLEQLLKLGDPNLREKKPWTPHRPERPQKSEGGVKFDLVS
DYQPRGDQPQAIEELVAGIEANERDQVLLGVTGSGKTYTMAQVIARTQRPALVLAPNKTL
AAQLYGEFKSFFPNNAVEYFVSYYDYYQPEAYVPRTDTYIEKESSVNEQIDRMRHAATRS
LLERDDVIIVASVSCIYGIGSVETYTAMTFGVSLGEKLEQRQLVTDLVALQYRRIGSDFT
RGTFRVRGDTVDIFPAHYEDRGWRISFFGDEVESICEFDPLTGKKTQDLEFVKVYANSHY
VTPRPTLLQSIKAIKDELRGRLGELNNAGRLVEAQRLEQRTRFDLEMMEATGSCAGIENY
SRYLTGRKPGEPPPTLFEYLPDNAIVFADESHVSIPQIGAMYKGDFRRKATLAEYGFRLP
SCMDNRPLRFEEWDAMRPQSVAVSATPGDWEMERTGGVFVEQVIRPTGLIDPPVEIRPAR
SQVDDLLGEVKAVSDAGYRSLVTVLTKRMAEDLTEYLHENGVRVRYMHSDIDTIERIEII
RDLRLGAFDVLVGINLLREGLDIPECGFVGILDADKEGFLRSETSLVQTIGRAARNVDGR
VILYADHITGSMQRAMDETDRRRAKQQAYNAEHGITPASIKRDIADILGSLAEQDHVTVD
AGLSELAPGHNMQATLADLEKRMKAAAADLAFEEAARLRDEISRLQRAELLAEANPLMRP
RGRGGEAPAISGTRARKPTDADMGPHNFGGGEARPLSRPAPRSMAGKAGTKVVKGKLNK
NT seq
2520 nt
NT seq
+upstream
nt +downstream
nt
atggcctctcctcccaaaaagcccaaaaaccccgccaagccgacgcgcgccaaggccgcc
aagcccgaggtgtcgccgatcgcgccgcatctgcaggcgctgctcaaccccggtctcgcc
gaacgacaggccggcttcgaggaggcgccgcaggcggcctatgacgccggcgcggtcgat
ggcgagctcgttgagcggctcgatctcggcggggcgggcggcgtgtcggcgacgatggag
agtctcgagcagctgttgaagctgggcgatcccaatctgcgcgagaagaagccttggacg
ccgcatcggccagagcggccgcaaaagagcgaaggcggcgtcaaattcgatctcgtctcc
gattatcagccgcgcggagaccagccgcaggcgatcgaggagctggtcgccggcatagag
gcgaatgagcgcgatcaagtgctgctcggcgtcaccggctccggcaagacctacacgatg
gcgcaggtgatcgcgcgcacgcagcggccggcgctggtgctggcgccgaacaagacgctc
gccgcccagctctatggcgagttcaagagcttcttccccaataacgccgtcgaatatttc
gtgtcctattatgattattatcagcccgaggcctatgtgccgcgcaccgacacctacatc
gagaaagaatcctcggtgaacgagcagatcgaccgcatgcgccacgcggccacgcgctcg
cttctggagcgcgacgacgtcatcatcgtcgcttcggtctcctgcatctatggcataggc
tcggtcgaaacctatacggcgatgacattcggcgtcagcctgggcgagaaattggagcag
cgccagctcgtcaccgatctcgtggctctgcaatatcgccgcatcggctccgatttcacg
cgcggcacgtttcgcgtgcgcggtgatacggtcgatattttcccggcgcactatgaggac
cgcggttggcgcatatccttcttcggcgatgaggtggagtcgatctgcgagttcgatccg
ctcaccggcaagaagacgcaagacctggagttcgtgaaggtctacgccaattcgcattat
gtgacgccgcgcccgacgctgctgcagtcgatcaaggcgatcaaggacgaattgcgcgga
cggctcggcgagctgaacaatgccgggcgtctcgtcgaggcgcagcgattggagcagcgc
acacgcttcgatctcgagatgatggaggcgaccggctcctgcgccggcatcgagaattac
tcgcgctatctcaccggccgcaagcccggcgagccgccgccgacactgttcgaatatctg
cccgataacgccatcgtcttcgccgacgagagccatgtgagcattccgcagatcggcgcc
atgtacaagggcgactttcgccgcaaggcgacgctcgccgaatatggcttccgcctgccg
tcctgcatggacaatcgtcctttgcgtttcgaggaatgggacgcgatgcgcccgcaatcg
gtcgccgtctcggcgacgccgggcgattgggaaatggagcgcaccggcggcgtctttgtc
gagcaggtcattcgcccgaccggcctcatcgatccgccggtggagatacgtcccgcgcgc
tcgcaggtcgacgatctcttaggggaagtgaaggcggtgagcgacgccggctatcgctcg
ctcgtcactgtgctcaccaagcgcatggcggaggacttgaccgaatatctgcacgagaat
ggcgtgcgcgtgcgctacatgcattcggacatagacacgatcgagcgcatcgagatcatt
cgcgatctcagactcggcgccttcgacgtgctggtcggcatcaatcttctgcgcgaggga
ttggatattcccgaatgcggcttcgttggcattctcgacgccgataaggaaggctttctg
cgctccgagacctcgctggtgcagaccatcggccgcgccgcgcgcaatgtcgatggacgc
gtgatcctctatgcggatcacatcaccggctccatgcagcgcgccatggacgagaccgat
cgccgccgcgccaagcagcaggcctataatgccgagcacggcatcacgccggcgagcatc
aagcgcgacatcgccgatattctcggctcgctcgccgagcaggatcatgtgaccgtggac
gccggcctctccgagctggcgccgggccacaatatgcaggcgacgctcgccgatctcgag
aagcgcatgaaggcggccgccgccgatctcgccttcgaggaggcggcgaggctgcgcgac
gagatttcccgcctgcaacgcgccgagcttctcgccgaggccaatccgctgatgcgcccg
cgcgggcggggaggggaggcgcccgcgatctccggcacgcgcgcgcgtaagccgaccgac
gccgatatgggtccgcataatttcggcggcggcgaagcgcgcccgctgtcgcgtcccgcg
ccgcggtcgatggcgggcaaggcggggacgaaggtggtgaaggggaagctgaacaaatag
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