Methylosinus sp. C49: MSC49_31380
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Entry
MSC49_31380 CDS
T09855
Symbol
uvrD1_1
Name
(GenBank) DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
mecq
Methylosinus sp. C49
Pathway
mecq03420
Nucleotide excision repair
mecq03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
mecq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
MSC49_31380 (uvrD1_1)
03430 Mismatch repair
MSC49_31380 (uvrD1_1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mecq03400
]
MSC49_31380 (uvrD1_1)
Enzymes [BR:
mecq01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
MSC49_31380 (uvrD1_1)
DNA repair and recombination proteins [BR:
mecq03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
MSC49_31380 (uvrD1_1)
MMR (mismatch excision repair)
Other MMR factors
MSC49_31380 (uvrD1_1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
Viral_helicase1
AAA_30
AAA_12
RecR_HhH
AAA_11
HHH
DEAD
Motif
Other DBs
NCBI-ProteinID:
BBU63203
UniProt:
A0A679F753
LinkDB
All DBs
Position
3342859..3344922
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AA seq
687 aa
AA seq
DB search
MTAVAYLEKLNAEQRRAVEHGLADGSSASAGGPLLIIAGAGSGKTNALAHRVAHLIVRGA
DPQRMLLMTFSRRAAAEMTRRVERICAEALGGKGGGDVLAWAGTFHAIGARLLREYASAI
GLDPAFTIHDREDSADLMNLIRHELGFSKTESCFPTKGTCLAIYSRAVNAEIPLEQALLG
AFPWCARWHEELRRLFAAYVEAKQAQNVLDYDDLLLYWAQMMQDDALAEEVGGRFDHILV
DEYQDTNRLQASILLALKPKGQGLTVVGDDAQSIYSFRAATVRNILEFPKSFTPPAEIVT
LDRNYRSTEPILAAANAVISLAAERYAKNLWTERRSSERPQLVTVRDESDQARFIAERVL
EAREAGMTLKQQAALFRASHHSAMLELELARRNIPFVKFGGLKFLDSAHVKDVLALLRFA
QNPRDRVAGFRILQILPGVGPSSAQKILDFLIELPDPLACLADAPTPPRAGEEWRGLVAT
LQMLHAREGWPAEMEAARRWYEPHLERLHEDAPSRLADLVQLEQIAACYPSRERFLTELT
LDPPDATSDEAGPPLRDEDYLILSTIHSAKGQEWKSVFVLNCVDGCIPSDLATGTAAEIE
EERRLLYVAMTRAKDSLRLVTPQRFFTHGQPAQGDRHVYAARTRFIPAEMLRFFDCVSWP
AAAAAGERLAGGGLRVDVGAKMRGMWG
NT seq
2064 nt
NT seq
+upstream
nt +downstream
nt
atgaccgccgtcgcctatctcgaaaagctcaacgccgaacagcgccgcgccgtcgagcac
ggccttgctgacggctcgtcggcctccgccggcggcccgctgctcatcatcgcgggagcc
ggctccggcaagacgaacgcgctcgcccatcgggtcgcgcatctcatcgttcggggcgcc
gatccgcagcgcatgttgctgatgaccttctcccgccgcgccgccgccgagatgacgcgg
cgggtcgagcgcatctgcgccgaggcgctgggcggcaagggcggcggcgatgtcctcgcc
tgggccgggacgtttcacgcgatcggcgcgaggctgctgcgcgaatacgccagcgccatc
gggctcgatcccgccttcaccatccatgatcgcgaagactccgccgatctgatgaatctc
atccgtcacgagctcggcttctccaagaccgagagctgcttcccgaccaagggaacgtgc
ctcgcgatctactcccgcgccgtgaacgccgaaatcccgctggagcaggcgctgctcggc
gccttcccctggtgcgcccgctggcatgaagagctacgccgattgttcgccgcctatgtc
gaggcgaagcaggcgcagaatgtgctcgattacgatgatctcctgctctattgggcgcag
atgatgcaggacgacgccctcgccgaggaggtcggcggccgcttcgatcacattctcgtc
gacgaatatcaggacaccaatcgcctccaggcctccatcctgctcgccttgaagcccaag
ggccaggggctcaccgtcgtcggcgacgacgcgcaatccatctactccttccgcgccgcc
actgtgcgcaacattctggaatttccgaagagcttcacgccgccggcggaaatcgtcacg
ctcgaccgcaattatcgctcgaccgagccgatcctcgccgccgccaacgccgtcatctcg
ctcgccgccgagcgctacgccaagaacctctggacggagcgccgctcatcggagcggccg
cagctcgtcaccgtgcgcgacgagagcgatcaagcgcgtttcatcgccgagcgcgtgctc
gaggcgcgcgaagccggcatgacgctgaagcagcaggcggcgctgttccgcgcctcgcat
cacagcgccatgttggagctggagctcgcgcgccgcaacattcccttcgtgaaattcggc
gggctgaagttcctcgacagcgcgcatgtgaaggatgttctcgccctgctgcgcttcgcg
cagaacccgcgcgatcgcgtcgccggctttcgcattctgcaaatcctgcccggcgtcggc
ccctcctctgcgcagaagattctcgacttcctcatcgagcttccggacccgctcgcctgc
ctcgccgacgctccgacgccgccgcgcgccggcgaggagtggcgcggcctcgtcgcgacg
ctgcaaatgctgcatgcgagagagggctggccggcggaaatggaagcggcgcggcgctgg
tatgagccgcatctcgagcgcctgcacgaagacgcgccgagccgcctcgccgatctcgtc
cagctcgagcagatcgcggcctgctatccctcgcgcgagcgcttcctcaccgagctgacg
ctcgacccgccggacgcgaccagcgacgaggccgggccgcctctgcgcgacgaggattat
ctcatcctctcgacgatccattcggccaaagggcaggagtggaagtcggtcttcgtgctg
aactgcgtcgacggctgcatcccctccgatctcgcgacgggaacggcggcggagatcgaa
gaggagcgccgtctgctctacgtcgcgatgacgcgcgcgaaggacagcctgcgtctggtg
acgccgcagcgatttttcacccatggccagccggcgcagggcgaccggcacgtctacgcc
gcgcgcacgcgattcattccggcggagatgctgcggtttttcgattgcgtgagctggccg
gccgcagcggctgcgggcgagcgtctcgccgggggtgggctgcgggtcgatgtgggggcg
aagatgcgggggatgtgggggtga
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