Methylosinus sp. C49: MSC49_34550
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Entry
MSC49_34550 CDS
T09855
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
mecq
Methylosinus sp. C49
Brite
KEGG Orthology (KO) [BR:
mecq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mecq03016
]
MSC49_34550 (truB)
Enzymes [BR:
mecq01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
MSC49_34550 (truB)
Transfer RNA biogenesis [BR:
mecq03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
MSC49_34550 (truB)
Prokaryotic type
MSC49_34550 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
Motif
Other DBs
NCBI-ProteinID:
BBU63520
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All DBs
Position
3695189..3696088
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AA seq
299 aa
AA seq
DB search
MNGRKSTRAVVDGWVVLDKPVGMTSTHAVSRLKRIYNGKKAGHAGTLDPLASGILPIAFG
EATKTVPFVQDGEKAYSFTVRWGVETDTDDADGKSVRESEERPTIAQIEALLPRFLGDIL
QVPPQYSAIKIAGERAYDLARDGETVELKPRPVTIHRLSIVDATEEETKLVMECGKGAYV
RSIARDLGRLLGCFGHVTALRRTRVGPFLEEDSYTLDEIEGGEAANALLSVEAGLTELPC
VVVDRDAAARLRRGGSLILRGRDAPAGGVVYAACGGVPVAFGEVVEGALEPSRVFNLPF
NT seq
900 nt
NT seq
+upstream
nt +downstream
nt
atgaacggaagaaaatcgacccgcgccgtcgtcgacggctgggtggtgctcgacaagccc
gtcggcatgacctcgacgcacgccgtctcgcgcttgaagcgaatctataatggcaagaag
gccggacacgccggcacgctggacccgctcgcctccggcatattgccgatcgctttcggc
gaggcgaccaagaccgtgcctttcgtgcaagacggcgagaaggcttattccttcaccgtg
cgctggggcgtcgagaccgacacggacgacgccgacggcaaatccgtgcgcgagagcgag
gagcggccgacgatcgcgcagatcgaggcgctgctgccgcgctttctcggcgacatattg
caggtgccgccgcaatattccgccatcaagatcgccggcgagcgcgcctatgatctcgcg
cgcgacggcgagacggtggagctgaagccccgccccgtcaccatccatcgcctctccatc
gtcgatgcgacggaggaggagaccaagctcgtcatggaatgcggcaagggcgcctatgtg
cgctccatcgcgcgcgatctcggacggctgctcggctgcttcggccatgtgaccgcgctg
cgccgcacgcgggtcggccccttcctcgaggaggacagctacacgctggacgagatcgag
ggcggcgaagcggccaatgcgcttctctcggtcgaggcgggcctcaccgagctgccctgc
gtcgtcgtcgatcgcgacgccgcggcgcggctgcggcgcggcggctcgctgatcctgcgc
ggccgcgacgcgcctgcgggcggcgtcgtctatgcggcctgcggcggcgtacccgtcgct
ttcggcgaggtggtggaaggcgcgctggagccctcgcgcgtgttcaacctgccgttctga
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