Methylosinus sp. C49: MSC49_35510
Help
Entry
MSC49_35510 CDS
T09855
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
mecq
Methylosinus sp. C49
Pathway
mecq03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mecq00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MSC49_35510 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mecq03019
]
MSC49_35510 (pnp)
03016 Transfer RNA biogenesis [BR:
mecq03016
]
MSC49_35510 (pnp)
Enzymes [BR:
mecq01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
MSC49_35510 (pnp)
Messenger RNA biogenesis [BR:
mecq03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
MSC49_35510 (pnp)
Transfer RNA biogenesis [BR:
mecq03016
]
Prokaryotic type
tRNA degradation factors
MSC49_35510 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
PNPase
RNase_PH_C
S1
KH_1
OB_RRP5_4th
KH-I_KHDC4-BBP
S1_RRP5
aRib
Motif
Other DBs
NCBI-ProteinID:
BBU63616
LinkDB
All DBs
Position
3792483..3794630
Genome browser
AA seq
715 aa
AA seq
DB search
MFQIHREELDWAGRKLILETGKIARQADGAVFASWGETTVLATVVSAKAPKPGQDFFPLT
VNYQEKAFAAGRIPGGYFKREGRPSERETLVSRLIDRPIRPLFPDGYRNDTQVIVTVLSH
DLENDPDILAMVAASAALTLSGIPFMGPIGGARVGYINGQLKLNPTIEEMKLSGLDLVVA
GTSDAVLMVESEAQELSEDLMLEAVMTGHRGFQPVIDAIIRLAERAAKDPRDLNVADKTE
VNAAVAAIAETELRAAYKITVKQDRYAAVDAVKAKVFAGLLPEGGEAKFSKEHVAEAFHD
LQAKVVRWNILDDGIRIDGRDVKTVRPIVAEVGVLPRAHGSALFTRGETQALVVATLGTG
EDEQFVDSLEGTYKERFLLHYNFPPYSVGETGRMGSPGRREIGHGKLAWRAIRPMLPAAA
EFPYTLRVVSEITESNGSSSMATVCGSSLALMDAGVPLKKPTAGIAMGLILEGARFAVLS
DILGDEDHLGDMDFKVAGTSDGVTSLQMDIKIAGITEEIMRVALGQAREGRLHILGEMAK
ALTTSRAELGEFAPRIETLKIATDKIREVIGTGGKVIREIVEKTGAKINIEDDGTVKVAS
SDGNSIKAAINWIKSIASDPEVGQIYEGTVVKTADFGAFVNFFGAKDGLVHISQLSKQRV
NKTTDVVKEGDKVKVKLLGFDDRGKVRLSMRVVDQQTGEDLEAKEKAEAANAASE
NT seq
2148 nt
NT seq
+upstream
nt +downstream
nt
atgttccaaatccatcgcgaagagctcgactgggcgggccgcaagctgatcctcgagacc
ggcaagatcgcccgccaggcggacggcgccgttttcgccagctggggcgagaccactgtg
ctcgcgaccgtcgtctccgccaaggcgcccaagcccggccaggacttctttccgctgacg
gtgaattaccaggagaaagccttcgccgccggccgtattccgggcggctatttcaagcgc
gaaggccgccccagcgagcgcgagacgctggtctcccgcctcatcgaccggccgatccgc
cccttgttcccggacggctatcgcaatgacacgcaggtcatcgtgacggtgctgagccac
gatctcgagaatgacccggatattctcgccatggtcgcggcttcggcggcgctgacgctc
tcgggcattcccttcatggggccgatcggcggcgcccgcgtcggctatatcaacggccag
ctcaagctcaatccgacgatcgaggagatgaagctctcgggcctcgatctcgtcgtcgcc
ggcacgtcggacgccgtgctgatggtggaatcggaggcgcaggagctgtccgaggatctg
atgctcgaggcggtgatgaccggccatcgcggcttccagccggtgatcgacgcgatcatc
cgtctcgccgagcgcgccgccaaggatccgcgcgacctcaatgtcgccgacaagaccgag
gtcaacgccgccgtcgccgccatcgccgagacggagctgcgcgccgcctataagatcacg
gtgaagcaggatcgctacgccgccgtggacgcggtgaaggccaaggtcttcgccggcctg
ctgccggaaggcggcgaggcgaaattctccaaggagcatgtcgccgaggccttccacgat
ctgcaggccaaggtcgtgcgctggaacattctcgacgacggcattcgcatcgacggccgc
gacgtgaagaccgtgcgaccgatcgtcgccgaggtgggcgtgctgccgcgcgcgcatggc
tccgctctgttcacccgcggcgagacgcaggcgctggtcgtcgcgacgctcggcaccggc
gaggacgagcaattcgtcgactcgctcgagggaacctataaggagcgcttcctgctccac
tacaacttccctccctactccgtcggcgagacgggccgcatgggctcccccggccgccgc
gagatcggccatggcaagctcgcctggcgcgccatccgcccgatgctgccggcggccgcc
gaattcccctacacgctgcgcgtcgtctcggagatcaccgagtccaacggctcctcgtcc
atggccaccgtctgcggctcctcgctggcgctgatggacgcgggcgtgccgctgaagaag
ccgacggccggcatcgccatgggcctcatcctcgagggcgcgcgcttcgccgttctctcc
gacattctcggcgacgaggatcatctcggcgacatggacttcaaggtggcgggcacgtcg
gacggcgtcacctcgctgcagatggacatcaagatcgccggcatcacggaagagatcatg
cgcgtggcgctgggccaggcgcgtgagggccgtctgcatattctcggcgagatggccaag
gcgctcaccacctcgcgcgccgagctcggcgagttcgcgccgcgcatcgagacgctgaag
atcgccaccgacaagatccgcgaggtgatcggcaccggcggcaaggtcattcgcgagatc
gtcgagaagaccggcgccaagatcaacatcgaggacgacggcacggtgaaggtcgcctcc
tccgacggcaactccatcaaggcggcgatcaattggatcaagtccatcgcctcggacccc
gaggtcggccagatctatgagggaaccgtggtgaagaccgccgacttcggcgccttcgtc
aatttcttcggcgccaaggacggcctcgttcacatctcgcagctctccaagcagcgcgtg
aacaagaccaccgacgtggtgaaggaaggcgacaaggtgaaggtgaagctgctcggcttc
gacgatcgcggcaaggtgcgcctctccatgcgcgtcgtcgaccagcagaccggcgaggac
ctcgaggccaaggaaaaggccgaggccgccaacgccgccagcgagtga
DBGET
integrated database retrieval system
