Methylosinus sp. C49: MSC49_38870
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Entry
MSC49_38870 CDS
T09855
Name
(GenBank) ATPase AAA
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
mecq
Methylosinus sp. C49
Pathway
mecq04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
mecq00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
MSC49_38870
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mecq03019
]
MSC49_38870
03009 Ribosome biogenesis [BR:
mecq03009
]
MSC49_38870
04131 Membrane trafficking [BR:
mecq04131
]
MSC49_38870
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
mecq04147
]
MSC49_38870
Messenger RNA biogenesis [BR:
mecq03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
MSC49_38870
Ribosome biogenesis [BR:
mecq03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
MSC49_38870
Membrane trafficking [BR:
mecq04131
]
SNARE
SNARE associated proteins
Others
MSC49_38870
Autophagy
Aggrephagy
Other aggrephagy associated proteins
MSC49_38870
Exosome [BR:
mecq04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
MSC49_38870
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
AAA_16
AAA_5
RuvB_N
AAA_14
CDC48_2
AAA_33
AAA_22
AAA_28
AAA_2
RNA_helicase
nSTAND3
TIP49
NACHT
TsaE
NPHP3_N
Mg_chelatase
AAA_3
ABC_tran
DUF815
AAA_18
IstB_IS21
ATPase
Viral_helicase1
Zeta_toxin
Sigma54_activat
AAA_11
Parvo_NS1
NB-ARC
AAA_lid_PRS2_C
Motif
Other DBs
NCBI-ProteinID:
BBU63952
UniProt:
A0A679FE29
LinkDB
All DBs
Position
pMSC49b:11658..13838
Genome browser
AA seq
726 aa
AA seq
DB search
MIDVSADAPLSLTVAEARREDVGRGIVRLDPEALATLGAAPGDILLLEGKTRTTAKAMPT
YKSHRGQQIIQLDGVVRINAGAKLHSKIAVSAAPRREAVRVAMTPLEPSRISEEELDFIA
RRLDGLPVLRGDLVRAALFSAGHRDFRVTRTEPEGPVIVHPDTLLVIDKEIGREKRAENA
RNDVEGVVTYDDLGGMERELEKVREMIELPLTHPEVFDRLGIRPPKGVLLHGAPGCGKTL
LARAIAHETNAAFIYVSGPEIIQKFYGESEARLRKIFDDAKTRAPCIVFFDEIDAVAPKR
EKVEGEVEKRVVAQLLALMDGLESRGEVIVMAATNRPDSLDPALRRPGRFDREITISVPS
RRGRREVLEIHSRGMPLAADVDLDRLAEAAHGFTGADLAALCREAAMAALRRNLPILSPD
KGPVPYDALLAMEVTMEDCSAALSEVEPSGLREFTIDVPNVGWEEVGGLDTVKSALLEAI
NWPLSQPDLFEKIGLQAPRGILLYGPPGNGKTLVVKALATQGNLNFISVKGPELLSKYVG
ESERAVRDLFARARQSAPCLVFLDEVDALAPSRGSDERSPVTDRVTSQLLTELDGVEARK
DVWVIAATNRSDMLDEALLRPGRLDYHIEVPRPDVTARNAILDVHLRRRPIDPAVDIEDL
ARRTEGMSAAELRFFCDRATMNALRRIFPSTSNAGRASVANIQLQQEDFEHALANPVRRA
SIRATP
NT seq
2181 nt
NT seq
+upstream
nt +downstream
nt
atgatcgacgtttcggcggacgcgccgctttcactcaccgtcgccgaggcgaggcgcgag
gatgtcggccgcggcatcgtgcggcttgatccagaggctctggcgacgctcggcgccgcg
cccggcgacattctcctgctcgagggaaagacccggacgaccgccaaggcgatgcccaca
tacaaatcgcatcgcggccagcagatcattcagctcgacggtgtcgtgcggatcaacgcc
ggcgccaagctgcacagcaagatcgccgtatcggcggcgccgcgccgagaggccgtccgc
gtggcgatgacgccgctcgagcccagccggatcagcgaggaagagctcgatttcatcgcg
cgacggctcgatggtctgcctgtgctgcgcggcgatctggtgcgggcggcgctgttctcg
gctgggcatcgcgattttcgcgtcacgaggaccgagccggaggggccggtgatcgttcat
cccgacacgcttctcgtcatcgacaaggagatcgggcgggaaaaaagggcggagaacgcc
agaaacgacgtggagggagtcgtcacctatgacgatctcggcggcatggagcgcgagctc
gagaaagttcgggagatgatcgaactgccgctcactcatccggaagttttcgaccggctc
ggcatccgtccgcctaagggcgtgctcctgcacggcgcgccgggctgcggtaagaccttg
ctggcgcgcgccatcgcgcatgagacaaacgccgccttcatctatgtgagcggtcccgag
atcatccaaaaattctacggcgagagtgaagcgcgactgcgcaagatatttgacgatgcg
aagacgcgtgcgccctgcatcgttttcttcgacgagatcgatgcggtcgcgccaaagcgc
gagaaagtcgagggagaggtcgagaaacgcgtggttgcgcagcttctggcgctgatggac
gggctcgagagtcgcggcgaggtcatcgtcatggcggcgaccaaccgtcccgatagcctt
gatcccgcactgcgtcgtccgggccgcttcgaccgagaaatcacgatttccgtgccgtcc
aggcggggccggcgggaggttctcgaaattcattcgcgtggaatgcctctcgccgccgat
gtcgatctcgatcgcctagccgaggccgcgcatgggttcaccggggccgatctcgcggcg
ctctgccgggaggcggcgatggccgccctccgacgcaatctgccgatcctatcgcccgac
aaggggcctgttccttacgacgctttgctggcgatggaggtcacgatggaggattgttcg
gccgcgctgtcggaggtggagccgtccggcctacgtgagttcacgatcgacgtacccaat
gtcggctgggaggaggtcggagggctcgacaccgtcaaatcggctctgctcgaggcgata
aactggccgctatcgcaacccgatctcttcgagaaaatcgggctccaggcgccgcgcggc
atcttgctctatggaccgcccggcaatggcaagacattggtcgtcaaggcgctcgccacg
cagggcaatctcaatttcatcagcgtcaaagggccggagctgctctccaaatacgtcggc
gaatccgaacgggcggtgcgggatctcttcgcccgcgcccgccagtcggcgccctgcctg
gtctttctcgacgaagtcgatgcgctcgcgccgagccgagggtcggacgagcgatcgccg
gtgacggatcgggtcacgagccagcttctcacggagctcgacggggtcgaggcgcgcaag
gacgtatgggtgatcgccgccaccaatcgttccgacatgctggacgaggcgctgctgcgt
ccgggccggcttgattatcatatcgaggtgccgaggccggacgtgacggcgcgaaacgcc
atattggatgtgcatcttcggcgtcgaccgatcgacccggcggtcgatatcgaggatctg
gctcggcgcacggagggcatgtccgccgccgagctgcgctttttttgtgatcgcgccacg
atgaatgcactccgccgcatttttccgtccactagcaacgccgggcgagcgtccgtcgcc
aatattcagctccagcaggaagacttcgagcacgctctcgccaatccggtccgtcgcgcg
tcgatccgtgcgacgccttga
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