Megasphaera elsdenii: MELS_0292
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Entry
MELS_0292 CDS
T01633
Name
(GenBank) ATP-dependent helicase/nuclease subunit A
KO
K16898
ATP-dependent helicase/nuclease subunit A [EC:
5.6.2.4
3.1.-.-]
Organism
med
Megasphaera elsdenii
Brite
KEGG Orthology (KO) [BR:
med00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
med03400
]
MELS_0292
Enzymes [BR:
med01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
MELS_0292
DNA repair and recombination proteins [BR:
med03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
MELS_0292
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PDDEXK_1
UvrD_C_2
AAA_30
AAA_16
DEAD
ResIII
AAA_12
Motif
Other DBs
NCBI-ProteinID:
CCC72515
UniProt:
G0VLD5
LinkDB
All DBs
Position
complement(326011..329646)
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AA seq
1211 aa
AA seq
DB search
MAWTNEQQAAIDSRGQTLLLSAAAGSGKTAVLVERIIRRLLDKEYPVDITELLVVTFTKA
AAAEMRDRIGTALMKALSETQDPRVERQLALLPSAQISTLHAFCQHVIRKYFYTIDLDPA
FSIAGEEELNLLRRQVLEDVFLSYYEDDEKASVLYPLADMFGSDRGDDVLMDTVSRMYTY
ARSMAWPEHWLKAAAQAYDVAPDAVIDDMVWAEPVKDAVRRILEEDVRRYEGVLYHLRQR
EAFAPACDQFTAEQAALRQAVQAQSWNDLSRFVRAIDFPRLKGLRKLSDEDKAVWERCKK
VRDDVKKDITKTLQPVYFSATPEEWLDGMRTMKPVMAGLVTLTLDFAKAYGAAKKEKGWI
DFSDLEHFCLQILLAPDASPEHPVPSAAAEELRSQYEEVFIDEYQDTNGVQELITRLVSG
DDNRFMVGDIKQSIYRFRLADPTLFLDKYQSFSRDEKAVQRCIDLGRNFRSVPVILDAVN
DVFLRAMTRDAAGMDYGEREKLYAGRQAPDDDRWIGGPVEVDIVPTAKDDEDDDGSTAFE
RESRFIARRIGELLASGRMAARKDGTLEPLSYRHIVILLRSMAGKADVLIQALQEGGIPA
YAEQSGGYFAAVEVQVMLSLLRCIDNPEQDLAMAAVLRSPLVGLDETALADVRLAGDGTL
WQNLPAYAAALPEGDDKKEDLLQFMETFDSWRTYSRRHGVAELLQRLYDDTAYVDFVGSM
PGGEVRQANLKALYDRAQQYEDAGFRGLFRYLQLMDKMKEDGLDLAPAKVVSENEDVVRI
MSIHKSKGLEFLVVFVADLGKAFNRRDMQEQILFHNRLGIGLKQYDPEWRMSYPTLIWSG
IAAQLRWEGTAEEERILYVAMTRARDRLILTGHSTHVADDWQRWTSRLNPAQAKSYFDWV
MPAALDTFGARADTEYVRPGAAWQGDIWDVHITPAGTAAAADDEACEQEPRLEALRRGDA
TGTPIPDWLDAQLSWQYAYPQAVRTAAKFSVSEVKRKYQELHSDELAEEEGLSISAGAVI
AAAPGEDDAFSELPPWLAEEEEKVSGAQRGTALHKALQYITPAADQTVDTLRREIETFVR
QGLLSRDEAKLVYVPVLAAFCQSDLGRRMAMSPELHREYPFTVLLAGGDPLPAVEGGERI
LIQGVIDCLFREDDGWILVDYKSDRLEREDAFRKRYAVQLALYKRAVEQITGRPVSETYI
YSLHLQKEIRI
NT seq
3636 nt
NT seq
+upstream
nt +downstream
nt
atggcctggacaaatgaacagcaggcagccattgacagccggggacagacgctgctcttg
tcggcagctgccggttccgggaagacggccgttttggtggaacgaatcatccgccgtctc
ctggataaggaatatcccgtcgatattaccgaattattagtcgttacctttaccaaggct
gccgctgccgaaatgcgcgaccgcatcgggaccgccctcatgaaagccttgtcggaaacg
caggacccccgcgtcgaacggcagctggccctgctgccatcggcccagatctcgacgctc
catgccttttgccagcatgtcatccgcaagtatttttatacgattgacctggacccggct
ttttccattgccggtgaagaagaattgaacctcttgcggcgtcaggtcctggaagacgtg
ttcttgtcctattatgaagacgatgaaaaggcatcggttctctatccgctggccgatatg
tttggcagcgaccgcggtgacgacgtgctcatggatacggtgagccgcatgtatacctat
gcccgcagcatggcctggccggaacactggctgaaagcggcggcccaggcctatgacgtg
gctcccgatgccgtcatcgacgatatggtctgggcggaaccggtcaaggatgccgtgcgc
cgtatcctggaagaagatgtccgccgttatgaaggcgtgctctaccacctgcgccaacgc
gaggcctttgcgcctgcctgtgaccagttcacggcggaacaggccgccctccggcaggct
gtacaggcgcagtcctggaatgatctgagccgcttcgtccgggccattgatttcccgcgc
ctgaaagggctgcggaaattatccgatgaagataaggctgtctgggaacggtgcaagaaa
gtgcgggatgacgtcaagaaagatatcaccaagacgctgcagcccgtttatttctcggcg
acgccggaagaatggctcgacggcatgcggaccatgaaaccggtcatggcgggtctggtg
acgctgaccctggattttgccaaagcctatggggcagcgaagaaagaaaagggctggatc
gacttcagcgacttggaacacttttgtctgcagatcctcctggcacctgacgcatcgccg
gagcatcccgtgccgtcagcagcggcggaagaactgcgcagtcagtatgaagaagtcttc
atcgatgagtaccaggatacgaacggtgtccaggaactcattacccgtctcgtctcgggc
gacgataaccgcttcatggtcggcgatatcaagcagagcatctaccgcttccgcctggcc
gacccgacgttgttcctcgataaataccagtccttcagccgtgatgaaaaggccgtgcag
cgctgtatcgacctggggcggaacttccgcagcgtcccggtcatcctcgatgcggtaaat
gacgtctttttgcgggccatgacgagggatgctgctggcatggactatggagaacgagaa
aaactctatgccggccggcaggctcccgatgatgaccgctggattggtggtcctgttgag
gtcgatatcgtgccgacggcaaaggacgacgaagacgatgacggcagtacggcctttgaa
agggaaagccgcttcattgcccgccgcatcggcgagctcctggccagcggccgtatggca
gcccgcaaggacggtacgctggagcccttgtcctatcgccatatcgtcatcctactgcgc
tccatggctggcaaggccgacgtcctcatccaggccttgcaggaagggggcattccggcc
tatgctgaacagagcggcggttattttgccgccgtcgaagtccaggtcatgttgtctctc
ctgcgctgtatcgataatccggaacaggacctggccatggcggcggtcctgcggtcgccc
ctggtcggattggatgaaacggccctggccgatgtccgcctggcgggggacgggacgctg
tggcagaacctgccggcctatgcggcagccctgcccgaaggggacgataagaaggaagac
ctgctgcagttcatggagacctttgattcgtggcgcacgtacagccgccgccatggtgta
gcagagctcttgcagcgcctgtacgatgatacggcctatgtcgatttcgtcgggtccatg
ccgggcggtgaggtgcgccaggccaacctgaaggccctgtacgaccgagcccagcagtat
gaggatgccggcttccgcggcctgttccgctatttgcagctcatggacaagatgaaagaa
gacggcctcgacctggcaccggctaaagtcgtcagcgaaaatgaagacgtcgtgcgcatc
atgagtatccacaagagcaaaggcctggaatttctggtcgtcttcgtcgccgatctgggt
aaagccttcaaccggcgcgacatgcaggaacagatactcttccacaaccgcctgggcatc
ggcctcaagcagtatgacccggaatggcgcatgtcttacccgacgctcatctggagcggc
atcgcggcccagctgcgctgggaagggacggccgaagaagaacgtatcctctatgtcgcc
atgacccgcgccagggatcggctcatcctgacaggccacagtacacatgttgccgatgac
tggcagcgctggacgagccgcctcaacccggcccaggccaaatcgtatttcgactgggtc
atgccggcggcgctcgacactttcggtgcccgggccgatacggaatatgtccggcccggg
gcagcttggcagggcgatatctgggacgtacacattacgccggctgggacggcggctgcg
gccgatgacgaggcctgtgaacaggaaccgcggctggaagctttgcggcgcggcgatgcg
acggggacgcccatcccggactggcttgacgcacagctgtcctggcagtatgcctatccc
caggccgtccggacagcggctaagttttccgtatccgaagtcaaacgaaaataccaggaa
ctgcatagtgatgaactggccgaagaagagggcctgtccatctcggccggtgccgtcatc
gctgccgcaccgggcgaagacgatgccttttccgaactgccgccctggctggccgaagaa
gaagagaaagtcagcggtgcccagcgcgggacggccctgcacaaagccctgcagtatatc
acgccggctgcggaccagaccgtggatacattgcgccgtgaaatcgaaacctttgtccga
caggggttgttgagccgtgacgaagcaaagctggtctacgtgccggtcttagccgccttc
tgtcagtctgacctgggccggcgcatggccatgtcgccggagctgcatcgtgaatatccg
tttaccgtgcttttggccggcggcgatcccctgcctgctgtggaagggggagaacgcatc
ttgatccaaggggtcatcgactgcctcttccgcgaagacgatggctggattctcgtcgac
tacaagtcggaccggctggaaagggaggacgctttccgcaagcgctatgccgtccagctg
gccttatacaaacgggctgtcgaacagattacgggcaggcccgtcagcgaaacttacatt
tacagcttgcatttacaaaaagaaatcagaatataa
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