Megasphaera elsdenii: MELS_0479
Help
Entry
MELS_0479 CDS
T01633
Name
(GenBank) DNA polymerase III
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
med
Megasphaera elsdenii
Pathway
med03030
DNA replication
med03430
Mismatch repair
med03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
med00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
MELS_0479
03430 Mismatch repair
MELS_0479
03440 Homologous recombination
MELS_0479
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
med03032
]
MELS_0479
03400 DNA repair and recombination proteins [BR:
med03400
]
MELS_0479
Enzymes [BR:
med01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
MELS_0479
DNA replication proteins [BR:
med03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
MELS_0479
DNA repair and recombination proteins [BR:
med03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
MELS_0479
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
AAA
DNA_pol3_gamma3
DNAX_ATPase_lid
RuvB_N
AAA_5
AAA_22
AAA_30
TIP49
AAA_16
AAA_19
AAA_14
AAA_7
AAA_assoc_2
Ribosomal_60s
Mg_chelatase
Rad17
nSTAND3
DUF6395
AAA_18
RCF1-5-like_lid
TsaE
AAA_2
DNA_pol3_delta_C
Motif
Other DBs
NCBI-ProteinID:
CCC72702
UniProt:
G0VME0
LinkDB
All DBs
Position
complement(555702..557621)
Genome browser
AA seq
639 aa
AA seq
DB search
MAYIALYRKWRPKDFEDVVGQSHITETLQKAIDTDKVAHAYLFSGPRGTGKTSTAKIFAR
AMNCVHGPTSHPCNECEVCRHIMSGESLDVVEIDAASNRSIEDIRTLRETIKFMPAEGHK
KIYIIDEVHMLTTEAFNALLKTLEEPPAHVIFILATTEPERIPMTILSRCQRYEFRRITS
EDIAKRLLYVAGQEQIDLTKGAAHILAVQADGGMRDALSMLDQCVSNTSGTIDEGVVRDL
LGLIGKDWLFSLAQAIFDGQGDVIIKAVDDVIHMGKEPRVILMELLAHLRAVMLCQAASS
SDTLSAYDDCLDELRKQAGEWTPAAVFQVLAILQQALLTAKTSPVPRIAVEMGLLMAARQ
LNQPPVVPVAAASAAKAPAKPAKTAVAEKPEVVPVPEEDDYSGGYGLEEAVPFPEEEFTS
PGPTVGQAPVQEAAAAMPQPARPPVPPAPPRPEPVKAAAPAANVPAPAPSPAAQPVASAE
YQDVWKKMCAILDKEKKKAVLSCIRNGRVVYIGEGQVIVAFKTAFMVKRANREDYYKFTD
AALSQILGGTYHMQGFLEGDAELDGYEKKKSNLTRPAEPEPLPEEDIPVPAPSQEAASSS
DETAWQPASIEDMDEAERAALGPLLKNVGDCNIYIENKK
NT seq
1920 nt
NT seq
+upstream
nt +downstream
nt
atggcatatattgcattataccgcaaatggcggccgaaggattttgaagatgtcgtcggc
cagtcccatatcacggaaaccctgcaaaaagcgatagatacggacaaagtagcccatgct
tacttgttttccggtccccgcgggacgggcaagacgagcacggctaaaatttttgcccgg
gccatgaactgtgtccacgggccgacgtcccacccgtgcaatgaatgtgaagtctgccgc
cacatcatgagcggcgagtccctggatgtcgtcgaaatcgatgccgcttccaaccgcagc
atcgaagacatccgcaccttgcgggaaacgattaaattcatgccggctgaaggccataag
aagatttacatcatcgatgaagtccatatgctgacgacagaagctttcaatgcccttctg
aagaccctggaagaaccgccggcccatgtcatcttcatcctggcgacgacggagccggaa
cggattcccatgaccatcttgtcgcgctgtcagcgttatgagttccggcgtattaccagc
gaggatattgccaaacgcctgctctatgtggccggacaggaacagatcgacctgaccaaa
ggtgctgcccatatcctggccgtccaggccgacggcggcatgcgcgatgctttgagtatg
ctcgaccagtgcgtcagcaacacgagcggtaccattgacgaaggcgtcgtccgcgatttg
ctaggcctcatcggcaaagactggctgttttccctggctcaggccattttcgacggccaa
ggcgatgtcatcatcaaggctgtcgacgacgtcatccatatgggcaaggagccgcgggtc
atcttgatggagctgctggctcatttgcgggccgtcatgctctgccaggccgcgtcatct
tccgacaccctttcggcttacgacgactgcctcgacgagttgcgtaaacaggctggcgaa
tggacgccagcggcagtttttcaagtcctggccattttacagcaggcactgctgacggcc
aagacgtcgccggttccgcgcattgccgtggaaatggggctgctcatggcagcgcggcag
ctgaatcagccgcccgttgtccccgttgcagcggcttctgccgccaaggctccggctaaa
ccggctaaaactgctgtggcagaaaagccggaagtcgtcccagttccggaagaggacgat
tacagcggcggctacggcctggaagaagctgttccctttccagaagaagagtttacttca
cctggacccaccgttggccaggcaccggtacaggaagctgcggccgctatgccccagcct
gctcgtccgcctgtgccaccggcaccgccccggcccgagcccgtgaaggcggccgctccg
gctgcgaacgtacccgctccggcaccgtccccggcagcgcagcctgtcgcatcggccgaa
taccaggacgtctggaaaaagatgtgcgccattctcgataaagaaaagaagaaagccgtc
ttgtcctgtattcgcaacggccgcgtcgtttacatcggcgaaggccaggtcatcgtcgcc
tttaagacggccttcatggtgaaaagggccaaccgggaagattactataagtttaccgat
gctgccttatcccagatactgggcggtacgtaccacatgcagggctttttggaaggtgat
gccgaactggatgggtacgaaaaaaaaaagagtaacctgacccggccggcggaacctgaa
ccgctgcccgaagaggatattccagttcctgcgccatctcaagaagcagctagttccagc
gatgaaacggcatggcaaccggcttccatcgaggatatggatgaagccgaacgagccgcc
ttgggaccattgcttaaaaacgtaggagactgtaatatatatatagaaaataaaaaataa
DBGET
integrated database retrieval system
