Megasphaera elsdenii: MELS_0733
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Entry
MELS_0733 CDS
T01633
Name
(GenBank) putative uncharacterized protein
KO
K12574
ribonuclease J [EC:3.1.-.-]
Organism
med
Megasphaera elsdenii
Pathway
med03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
med00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MELS_0733
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
med03019
]
MELS_0733
Messenger RNA biogenesis [BR:
med03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
MELS_0733
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_J_b_CASP
RNase_J_C
Lactamase_B
RMMBL
Lactamase_B_2
Anti-Pycsar_Apyc1
Lactamase_B_6
Motif
Other DBs
NCBI-ProteinID:
CCC72955
UniProt:
G0VNC7
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All DBs
Position
848696..850357
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AA seq
553 aa
AA seq
DB search
MAKKEKLMVIPLGGLGEIGKNMTVIQYGNDIIVIDAGLAFPDDDMFGIDLVIPDMSYLIE
NRDKVRAVVITHGHEDHIGGLSYLLNEVNVPVYATKLVCGLIEGKLKENHITNYTLNEVH
HGDEVQIGCMKVGFIHTNHSIPDASALYFRTPVGTIVHTGDFKMDLTPVDGRQMDIHKFA
ELGRRGVLLLMSDSTNAERAGYTESETTVGHAFRKAFRAAKGRIILATFASNISRIQQAI
NTAVQFKRKVTVLGRSMVNNVQIAIELGYLDVPEGVLIEPDELNRYPDDQILILTTGSQG
EPMAGLSRMASNNHRSVSIMPGDTVIISATPIPGNETGVGRTIDNLMRLGANVIAGRDKK
IHVSGHASQEELKLMLELIKPKYFIPVHGEYRMLKTHGDLAVMMGVAKDHVLIGDNGQIF
EFSNRSGHKTGHVNAGRVFVDGLGVGDVGNIVIRDRQQLAMEGVVIVVMTLAKGTSHPLA
GPDIVSRGFVYVRDSEELIREAHDRVAAVLERCEAGNIREWAVIKSQVRDTLSRYLYEKT
RRRPMILPIIMEV
NT seq
1662 nt
NT seq
+upstream
nt +downstream
nt
ttggctaaaaaagaaaaactcatggtaattcccttaggtggtttaggtgaaatcggcaag
aatatgacggtcatccagtacggaaatgacatcatcgtcatcgacgccggcctggccttc
ccggatgacgacatgttcggtatcgacctcgtcatcccggacatgagttacttgattgaa
aaccgggacaaagtacgggccgtcgtcatcacgcacggccatgaagaccatatcggcggt
ttgtcctacttgctcaatgaagtaaatgtgcccgtatacgcgacgaaactcgtatgcggc
ctcattgaagggaaactgaaagaaaaccacattacgaactatacactgaacgaagtgcat
cacggtgatgaagtacagattggctgcatgaaagtcggctttatccatacgaatcactct
atccccgacgccagtgccctctatttccgtacgcctgtcggaaccatcgtccatacaggc
gacttcaagatggatctgacccctgtcgatggccggcagatggacatccataaatttgcg
gaattaggccgccgcggcgtcctgctcctcatgtcggacagcaccaatgcggaacgggct
ggctataccgaatcggaaacgaccgtcggtcatgccttccgtaaagccttccgcgctgcc
aaaggccgtattattttggcgacattcgcctcgaatatttcccgtatccaacaggctatc
aatacggctgtgcagttcaaacgcaaagtcactgtcctcggacggagcatggtcaataac
gtccagattgctatcgaactgggctatctcgatgtccccgaaggggtcctcatcgaaccg
gatgaactgaaccgttatcctgacgatcagatcctcatcctgacgacgggcagccagggc
gaaccgatggccggcttgtcgcgcatggcttctaacaatcaccgcagtgtcagcatcatg
cctggcgatacggtcatcatttcggcaacgccgatcccgggcaatgaaaccggcgtcggc
cgcaccatcgataacctcatgcgcctcggtgccaacgtcatcgccggccgggataagaaa
atccacgtatcgggccatgccagccaggaagaattgaaactcatgctggaactgatcaag
ccgaagtatttcatccctgtccacggcgaataccgtatgctcaagacccacggtgacctg
gccgtcatgatgggcgtcgccaaggaccacgtcctcatcggcgacaacggccagatcttt
gagttctcgaaccgttccggccataagacgggccatgtcaatgccggccgcgtcttcgtc
gacggcctcggcgttggcgatgtcggcaacatcgtcatccgtgaccgccagcagctggct
atggaaggggtcgtcatcgtcgtcatgactctggccaaagggacgagccatcccctggcc
gggccggatatcgtttcccgcggcttcgtctatgtccgcgattcggaagaattaatccgc
gaagcgcatgaccgcgtcgccgctgtcctcgaacgctgcgaagccggcaatatccgcgaa
tgggctgtcatcaagtcccaggtccgcgatacgctgagccgctacttgtatgaaaagaca
cggcgccgtccgatgatcttgccgattattatggaagtataa
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