Megasphaera elsdenii: MELS_1502
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Entry
MELS_1502 CDS
T01633
Name
(GenBank) sigma54 specific transcriptional regulator
Organism
med
Megasphaera elsdenii
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
HTH_7
HTH_23
Mg_chelatase
HTH_28
HTH_38
AAA_5
HTH_29
AAA
PrpR_N
AAA_2
HTH_Tnp_1
HTH_IclR
HTH_22
HTH_8
Sigma70_r4_2
HTH_50
AAA_16
HTH_11
HTH_17
Terminase_5
bpMoxR
HTH_40
TetR_N
NUMOD1
HTH_36
HTH_Tnp_ISL3
HTH_Tnp_1_2
HTH_31
TrmB
AAA_19
HTH_5
TnsD
DUF603
HTH_20
HTH_6
CENP-B_N
HTH_3
AAA_22
Sigma70_r4
GerE
HTH_10
UPF0122
HTH_24
HTH_AsnC-type
MarR_2
AbiEi_4
AAA_7
HTH_AraC
HTH_26
DUF1492
Xre-like-HTH
Mga
nSTAND3
AAA_30
Parvo_NS1
Motif
Other DBs
NCBI-ProteinID:
CCC73723
UniProt:
G0VQM3
LinkDB
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Position
1648148..1649755
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AA seq
535 aa
AA seq
DB search
MKTEKMRGGRVQEIFKISIVTPSSQLYTKIEQFLPVTQKRKLAHLDLIDGSAADAAYRIR
KSIQAGRDAVILWDPMASAVAATYPQQRVFVVQPSVLDLLNCVRQVPEGKSCGVIIPFSL
RAYYDGLEVQFKAMGVTFYCLASDSDERAMQTAVHQAALSGIQYVVGSAGIETYARGEGL
GWIPLQPGWGGLVRAFFKALWSLRQSRMAPGRTISSRSGMMAYYHLDDIIGTSPMMQQVK
RLARIYAATESTILITGESGTGKEMMAQAIHNLSSRCHGPFIAINCGAVSESLLESELFG
YTGGSFTGARRDGREGLFEAANGGTLFLDEIGDMPYNLQNHLLRVLQERSVRRLGAHNVI
PIDVRIIAATNKDLEQAVQEHHFRLDLYYRLAVLLIHMPPLRQRREDVAVLARTLLQRFN
EQYGQPHDLGQDVLDYFQTLPWPGNVRQLANTIERLSLVVREEKITLPDLAWVLPNPPVV
PDKNVRDRNLKAMTYDYIEKLYQDGKSVSDIAKELGISRSTIYRMRQKYQNKKDM
NT seq
1608 nt
NT seq
+upstream
nt +downstream
nt
atgaaaacagaaaaaatgcggggggggagggtacaagaaatttttaagatttctatcgtt
actccatcatcccagttatatacaaaaattgaacaatttctgcctgtgacacagaagcgg
aagctggcccatcttgatttgattgatggcagtgcggctgatgcggcgtatcggatccgg
aaaagtatccaggccggccgggatgccgtcattttgtgggacccgatggcttcggctgtc
gccgccacgtatccgcagcaacgagtttttgtcgtccagcccagcgtcctcgatttgttg
aattgtgtccgtcaggttcccgaggggaaatcctgcggcgtcatcattcccttttcgctg
cgcgcctattatgatggtttagaggtgcagttcaaggcgatgggggtcactttttattgc
ctggcctcggatagcgatgagcgggcgatgcagaccgccgtccatcaggcggcactttca
ggcatccagtatgtcgtcgggagtgccggtatcgaaacgtatgctcgtggcgaaggactg
ggctggattcccttgcagccaggatggggcggcctcgtgcgggcttttttcaaagccctg
tggagcctgcgtcaatcccggatggccccgggaaggacgatttcatcgcggtccgggatg
atggcctattatcatttggacgatatcatcggtacttcgcctatgatgcagcaagtcaaa
aggttggcccggatttatgccgctacggaatcgaccatcctcattaccggtgaatcgggg
acgggaaaagaaatgatggcccaggctatccacaatctgagcagccggtgtcacgggccg
ttcatcgccatcaactgtggggccgtctcagaaagcctcttagagagtgaactctttggt
tataccggcggttcctttacgggagcgcgccgtgatggccgtgaagggctctttgaagca
gcaaatgggggaaccttattcctcgacgaaatcggagatatgccgtataatttgcagaac
cacttgcttcgggtcttgcaggaacgcagtgtccgccgcctgggtgctcacaatgtcatt
cccattgacgtccgtatcattgccgcgacgaataaggatttagaacaggctgtccaggag
caccacttccggctggacctctattaccgcctggctgtcctgctcatccacatgccgccc
ttgcgccagcgcagagaggatgtggccgtccttgcccggaccctgcttcagcggttcaat
gaacaatacggtcagcctcatgatttggggcaggacgtcctcgattatttccagaccctt
ccctggccgggaaatgtccgtcagctggccaataccatcgaacgcctgtccttggtcgtc
cgtgaggaaaagattaccttgcccgacttagcctgggtcctgcccaatccgcctgtcgtg
ccggacaagaatgtccgcgaccggaatctcaaggccatgacgtatgattacattgaaaaa
ctgtaccaagacggtaaaagcgtatcggatatcgccaaagaactcggcatcagccgctcg
acgatttaccggatgcggcaaaaatatcaaaataaaaaggatatgtag
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