Megasphaera elsdenii: MELS_1518
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Entry
MELS_1518 CDS
T01633
Name
(GenBank) ATP-dependent RNA helicase DeaD family protein
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
med
Megasphaera elsdenii
Pathway
med03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
med00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MELS_1518
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
med03019
]
MELS_1518
03009 Ribosome biogenesis [BR:
med03009
]
MELS_1518
Enzymes [BR:
med01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
MELS_1518
Messenger RNA biogenesis [BR:
med03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
MELS_1518
Ribosome biogenesis [BR:
med03009
]
Prokaryotic type
rRNA helicases
MELS_1518
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Flavi_DEAD
AAA_30
Cas3-like_C_2
Helicase_RecD
CMS1
Motif
Other DBs
NCBI-ProteinID:
CCC73738
UniProt:
G0VQN8
LinkDB
All DBs
Position
complement(1670267..1671847)
Genome browser
AA seq
526 aa
AA seq
DB search
MLEQFQNLNISEVIIRALNEMGFEEPTPIQAESIPVAMSGSDMIGQAQTGTGKTAAYGIP
VLEKILKAEPSKDIQTVVLSPTRELAMQVAEELNHLAQFTNIQALPIYGGQDMERQLRRL
RKCPQIIVATPGRLIDHMKRGTIDLSHITTIVLDEADEMLDMGFIDDINIIMAATPNTRQ
TLLFSATMPKPIQQLAETFLHDPLIIRMKAKEVTMDLIEQSYIEVPDRQKFDILCRLLDL
QEPDLAIIFVRTKRRVDEVSEALKKRGYSAEGIHGDLTQAKRDTVIRQFREKTIDILVAT
DVAARGLDISGVTHVFNYDLPQDPESYVHRVGRTGRAGQSGEATTFVIPREMEHLRTIER
LIKRRITRRKAPTFSEALEGAQQAAIRSLITTTEEGNFGTYKENAEELLSNYDSAALVAA
AIKLLTKEPDTTPVKITEEAPLRVHRSRNNRGDRNNRRYNRNDRRGDRRNRKDDGEGNSE
HRGERRRHFAPKNRDNNRNNSRNNQRRENKQHKEPNRSVFKPYFKD
NT seq
1581 nt
NT seq
+upstream
nt +downstream
nt
atgttagaacaattccaaaatttgaatattagcgaagtcattatccgcgctctcaacgaa
atgggctttgaagaaccgacgccaatccaggctgaatcgattcctgtcgccatgagcggc
agcgacatgattggtcaggcccagaccggtacgggtaagaccgctgcctatggcatcccg
gtcctggaaaaaatcctgaaagccgaaccgtccaaggatatccagaccgtcgtcctgtcg
ccgacgcgtgaactggccatgcaggtcgccgaagaactgaaccacctggcccagttcacc
aacatccaggccctgccgatctacggtggccaagatatggaacgccagctgcgccgcctg
cgcaaatgcccgcagatcatcgtcgctacgccgggccgcctcatcgaccatatgaaacgc
ggcaccatcgatttgagtcacattacgactatcgtcctcgacgaagccgacgaaatgctg
gacatgggcttcatcgatgacatcaacatcatcatggccgctacgccgaacacgcgccag
accctgctcttctcggctaccatgcccaaaccgattcaacagctggccgaaacgttcctg
cacgacccgctcatcatccgcatgaaggccaaagaagtcacgatggacctcatcgaacag
tcttacatcgaagtgccggaccgccaaaaattcgacatcctctgtcgtctcctggacctg
caggaaccggacctggccatcatcttcgtccgcaccaagcgccgcgtcgacgaagtatcg
gaagccctcaagaagcgtggatattccgccgaaggtatccacggcgatctgacccaggcg
aagcgcgacacggtcatccgccagttccgtgaaaagaccatcgacatcctcgtcgctaca
gacgttgccgcccgcggcctcgacatcagcggcgtcacgcacgtcttcaactacgacctg
cctcaggacccggaaagctacgtccaccgcgtcggccgtaccggccgtgccggccagagc
ggcgaagcgacgaccttcgtcattccccgcgaaatggaacacttgcggaccatcgaacgg
ctcatcaagcgccgcatcacccgccgcaaggcaccgaccttctcggaagccctggaaggc
gcccagcaggcagccatccgcagcctgatcacgacgacagaagaaggcaatttcgggacg
tacaaagaaaatgccgaagaactcctgtccaactacgactcggctgctctcgtagctgct
gccatcaagctcttgacgaaagaaccggacacgacgccagttaagatcaccgaagaagcc
ccgctccgcgtccaccgcagccgcaacaaccgcggcgaccgcaataaccgccgctacaac
cgtaacgaccgccggggagaccgccgcaaccgcaaagacgacggtgaaggcaacagtgaa
caccgcggtgaacgacgccgccatttcgctcccaagaatcgggacaacaaccgcaataat
tcccgcaacaaccagcgccgtgaaaataaacagcataaagaaccgaaccgttccgtattc
aaaccttattttaaggattga
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