Megasphaera elsdenii: MELS_1542
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Entry
MELS_1542 CDS
T01633
Name
(GenBank) S1 RNA binding domain protein
KO
K08301
ribonuclease G [EC:3.1.26.-]
Organism
med
Megasphaera elsdenii
Brite
KEGG Orthology (KO) [BR:
med00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
med03019
]
MELS_1542
03009 Ribosome biogenesis [BR:
med03009
]
MELS_1542
Messenger RNA biogenesis [BR:
med03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
MELS_1542
Ribosome biogenesis [BR:
med03009
]
Prokaryotic type
rRNA processing factors
MELS_1542
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_E_G
RNase_E_G_Thio
DUF6233
Motif
Other DBs
NCBI-ProteinID:
CCC73762
UniProt:
G0VQR2
LinkDB
All DBs
Position
1698368..1699807
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AA seq
479 aa
AA seq
DB search
MKTIIGNVMPEETRMAILEDGRLRDFAVERNDDMHIVNHIYKGTIQNILPSLQAAFVNIG
RHKNAFIYMGDMFPRAASKEEIQQMHLSIGQSVLVQVIKDEQGMKGPKVTTNVSLAGRYA
VLMPTVDYIGVSKKIRDEEERNRLRRIVSEIKPAGMGLIIRTVAKGVSREELLGDLKYLL
GTWDSICQRYKLARKPTLLYREADLVMRMIRDHFTADVKQVVVDSREAYERICQVFPDPA
WRSRVRFYEGAAPIFEHYGIEDSLKGLMSRIVPLPSGGNLVIDHTEALTVIDVNSSKYTG
NGSTLQDTIFHVNKEAAVEIARQLRLRDIGGIIIIDFIDMAQPTKRDEILQILTRETALD
CTKTRVLGMTALNLVEITRKKARQSLYQVQFSPCDVCGGSGVLYSPETVAIQIIRRLRHL
AGSHHLQGDVLIEAHPDVLALLKDKKRKAEWERELKRTLYFEESHHPNREVFSILSYQP
NT seq
1440 nt
NT seq
+upstream
nt +downstream
nt
atgaaaacaatcataggcaatgtcatgccagaagaaacgcgcatggcgatcctggaagat
ggccgtcttcgcgatttcgccgtcgaacgcaatgacgacatgcacatcgtcaatcatatc
tacaaggggacgatccagaacatcctgccgtcgctgcaggccgctttcgtcaacatcggc
cgccacaagaatgctttcatctatatgggcgatatgttcccgcgggcggcgtcgaaagag
gaaatccagcagatgcacctgtccataggtcagtcggtcctggtccaggtcatcaaggac
gaacagggcatgaaaggacccaaagtcacgaccaatgtcagcctggccggccgttatgcc
gtcctcatgccgacggtcgattatatcggcgtctctaaaaaaatccgcgacgaagaagaa
cgcaaccgcctgcgccgcatcgtgtcggaaatcaagcctgccggcatgggcctcatcatc
cgcaccgtcgccaaaggcgtgtcccgggaagaactcttaggcgacttgaagtatctcctg
gggacctgggacagtatctgccagcgctataagctggcccgcaagccgactctcttatat
cgcgaagccgacctggtcatgcgcatgatccgcgaccattttacggccgacgtcaagcag
gtcgtcgtcgacagccgcgaggcttatgaacggatctgccaggtcttcccggatccggcc
tggcgcagccgcgtccgcttttacgaaggcgccgcgcctatttttgaacactatggcatc
gaagacagcctgaaaggcctaatgtcgcgcatcgtgcccctgccgtcagggggcaatctg
gtcatcgaccatacggaagccctgacggtcatcgacgtcaacagcagcaagtatacaggc
aacggctcgaccttgcaggatacgattttccacgtcaacaaggaagccgccgtagaaatc
gcccgccagctgcgcctgcgcgacatcggcggcatcatcatcatcgatttcatcgacatg
gcccagccgacgaaacgcgacgagattttgcagatcctaacccgcgagacggccctggat
tgcaccaagacccgcgtcctgggcatgacggcgctgaatctggtggaaattacccgcaag
aaggcccgccagagcctctatcaggtccagttcagcccctgcgatgtctgcggcggttcg
ggcgtcctctattcgccggaaaccgtggccatccagattatccgccgcctgcgccacctg
gccgggagccatcatctgcagggcgacgtcctcatcgaggcgcatcccgatgtcctggcc
ctgctcaaggataagaagcgcaaagccgaatgggaacgggaactgaagcggaccctttat
tttgaagaatcgcaccacccaaatcgggaagtcttttccatcttgtcctatcagccctga
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