Megasphaera elsdenii: MELS_1624
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Entry
MELS_1624 CDS
T01633
Name
(GenBank) exonuclease
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
med
Megasphaera elsdenii
Pathway
med03420
Nucleotide excision repair
med03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
med00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
MELS_1624
03430 Mismatch repair
MELS_1624
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
med03400
]
MELS_1624
Enzymes [BR:
med01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
MELS_1624
DNA repair and recombination proteins [BR:
med03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
MELS_1624
MMR (mismatch excision repair)
Other MMR factors
MELS_1624
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD_C
UvrD-helicase
RNase_T
AAA_19
UvrD_C_2
AAA_30
Viral_helicase1
Rv2179c-like
AAA_11
AAA_12
DEAD
ResIII
AAA_16
DEDDh_C
DNApol_Exo
Retrotran_gag_2
Motif
Other DBs
NCBI-ProteinID:
CCC73843
UniProt:
G0VQZ3
LinkDB
All DBs
Position
complement(1785366..1787897)
Genome browser
AA seq
843 aa
AA seq
DB search
MELNDQQQQVVRDLSQPILLNAPAGTGKTRVLACRVAHILETKAAEGAQILCLTFTNRAC
KELKERIVATAHEKGLDVVVKTIHSFCYSLIKEETKRQSDCYNDFLLYDDEDCRQLIDNL
PAAAAAPGNDTQALQNYIEFAKKQRVLPDLHDFTAPKEPLQAWLHDHGDDLVRQYDAVLA
DNHAVDFTDLITGAYDFLTDKACCQRWRDRFRFIAVDEMQDTSEVEYAVISRLFPGRNVL
LCGDYFQTIYEWRGSYPEYILEQFRKTYHPREITFTTNYRATQLLLKAAEGCLNRLFGQV
TVHHIYPQPGQAAAAVPGDPIVVHKADNFIGESRWIFQELMRLPQQERLKACVLVRGNRQ
AQQLWTGINAHNQHYPPEDQLPVTCIDQFHLFKRQECKDVLAYLRLLLNKHDNLSLKRIL
LRFVPRIGRRTVETIESESYRRLGLRLCDFIDPISQETGDPYGLLLSALDEGRIVVFDVE
STGTDTTRDEIIQIAAVRLDAQGQVADTFNTYVRASRPVGASFYVHHISDETLEAQGMEP
RQALTAFLDFAKDAVIVGHNVTYDLSILHSELQRLGMGESGDFPYYDTLDIYRRFYPNLI
NHKLATLSETFPIDHQPSHDAFDDILATAGLLCYAVTKQIRPATTARRSSLAIYLPLFAP
FSRDIARFRRQSYQDRPIDLIAAVMNEGGVKAWYESHRDPSDAAQHIDRLENVRKLYRIA
KETDDPGQDPRDALAEFLKLTALSNSELDSMLAKDPKIPIITIHQAKGLEFDYVFLAHLE
DRVFPTFWSVKKGNIEEEKRLFYVAITRAKKRLYLIWHEGNGNQRYAPSRFLQSLDSQYI
EVR
NT seq
2532 nt
NT seq
+upstream
nt +downstream
nt
atggaattaaatgaccagcagcagcaagtcgtccgcgacctgtcgcagcccatcctgctc
aacgccccggccggcacgggcaagacccgtgtcctggcctgccgggtcgcccatatcctg
gaaacgaaggccgctgaaggcgcgcagatactctgtctgaccttcaccaaccgggcctgc
aaggagctgaaggaacgcatcgtcgctacggcccacgaaaagggcctggacgtcgtcgtc
aagacgatccacagtttctgttacagcctcatcaaagaggaaacaaagcgccagagcgac
tgttataatgattttctcctctacgatgacgaagactgccggcagctcatcgacaacctc
ccggcggcggcggcggcaccgggcaatgacacccaggccctgcagaactatatcgaattt
gccaagaaacagcgcgtcctcccggacctccacgatttcacggcgccgaaagaacccctc
caggcctggctccatgaccacggcgacgacctcgtccggcaatacgatgccgtcctggcc
gacaaccacgccgtcgatttcacggacctcatcaccggcgcctatgacttcctcacagac
aaagcctgctgccagcgctggcgggaccggttccgcttcatcgccgtcgatgaaatgcag
gacacgagcgaagtcgaatacgccgtcatcagccgcctcttccccggccgcaacgtcctc
ctctgcggcgattacttccagaccatttacgaatggcgcggctcctatccggaatacatc
ctggaacaattccgcaagacctatcatccccgggaaatcacctttacgaccaactaccgg
gctacgcagctcctcttgaaagctgccgaaggctgcctgaaccgtctcttcggccaagtg
acggtccaccacatctatccccagcccggccaggccgcagccgccgttcccggtgacccc
atcgtcgtccataaggcggacaacttcatcggcgaaagccgctggatcttccaggaactg
atgcgcctgccgcagcaggaacgactgaaagcctgcgtcctcgtccgtggcaaccgccag
gcccagcagctctggacgggcatcaacgcccacaaccagcactatccgccggaagaccag
ctgcccgtgacctgtatcgaccagttccacctgttcaagcgccaggaatgtaaagacgtc
ctggcctacctgaggctgctcctgaacaagcacgataacctgagcctgaagcggatttta
ttgcgcttcgtcccccgcatcggccggcgaaccgtagagaccatcgaaagcgaatcctac
cgccgcctgggccttcggctctgcgacttcatcgaccccatttcccaggaaacgggcgac
ccttacgggctcctgctatcagccctggatgaaggccggatcgtcgtcttcgacgtcgaa
agcaccggcaccgacacgacgagggatgaaatcatccagattgccgccgtccgcctcgat
gcccagggccaggtcgcggacaccttcaacacctatgtccgtgccagccggcctgtcggg
gcttccttctacgtccaccacatcagcgacgaaaccctggaggcccaggggatggaaccg
cgccaggctctgacggccttcctggactttgccaaagacgccgtcatcgtcggccacaac
gtcacgtatgacctgtccatcctgcacagcgagctccagcgcctaggcatgggcgaaagc
ggcgatttcccctattacgacacgctggacatctaccgccgcttctatcccaacctcatc
aaccacaaactggccacgctcagtgaaaccttccccatcgaccatcagccatcgcacgac
gccttcgacgacatcctggccacggccggcctcctatgctatgccgtaacgaaacagatc
cgcccggctacgacggcccgccgttcgtccctggccatctacctgcctctcttcgccccg
ttcagccgtgacatagcccgtttccgccgacagtcctatcaggaccggcccatagacctc
atcgccgccgtcatgaacgaaggcggcgtcaaggcctggtacgaaagccatcgcgacccc
agcgatgcggcccagcacatcgacaggctggaaaatgtccgcaagctctaccgcatcgcc
aaagaaacagacgacccgggccaggacccgcgcgacgccctggcagaatttctcaagctg
accgccctgtccaacagcgaactggacagcatgctggccaaggacccgaaaattcccatc
atcaccatccatcaggccaagggcctggaattcgattacgtcttcctggcccatctggaa
gaccgggtcttcccgaccttctggtccgtaaagaaagggaatatagaagaagaaaaacgc
ctcttttatgtcgccattacgcgggccaaaaagaggctgtatctgatctggcacgaaggg
aacggcaatcagcgctatgcgccgagccgcttcctccagagcctggattcccaatatatc
gaagttagatga
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