Megasphaera elsdenii: MELS_1920
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Entry
MELS_1920 CDS
T01633
Name
(GenBank) DNA polymerase III
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
med
Megasphaera elsdenii
Pathway
med03030
DNA replication
med03430
Mismatch repair
med03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
med00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
MELS_1920
03430 Mismatch repair
MELS_1920
03440 Homologous recombination
MELS_1920
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
med03032
]
MELS_1920
03400 DNA repair and recombination proteins [BR:
med03400
]
MELS_1920
Enzymes [BR:
med01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
MELS_1920
DNA replication proteins [BR:
med03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
MELS_1920
DNA repair and recombination proteins [BR:
med03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
MELS_1920
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
Motif
Other DBs
NCBI-ProteinID:
CCC74138
UniProt:
G0VS98
LinkDB
All DBs
Position
complement(2112781..2115432)
Genome browser
AA seq
883 aa
AA seq
DB search
MFSNLHTHTDYSLHDGYAKIPDLVSRAKELGYPALAITDHGTVTGLIDFYEECKKQGIKP
ILGCEFYYTNEITVKEAPTYHLLILAKDNDGYKNMMKMDTYAHEHFYRKPRIGIEALKQY
HEGLICTTACIAGPLSASEPESLYNNLLEIFGDDLYVEIQPHDFQEQIEYNEKWKDYFPS
SKTIVTLDSHYIDKEDIQAHKLWLGLGDDSQYYASDDYYLRSEDEVLDWFKKYGIDAKSY
IDNVQEIVDKCNVEIEFGGQHYPVFCDDPATYVKQKCNEGFKALGISKYPNKDKYIKQVR
HEFKILSDLGYLNYFCIIDDMIRHCREVGIPTGLGRGSVVGSLTAYLMGITKLDPIKYNL
VFERFANPERVTPADIDTDVSTPRRGDVIEYVKEKYGEVYQVRTISYVQDKSAVQRAAQA
INGKHYLDLISEYKKTDSYKKKAEENERLADHDAFIACRNKELIKPVEYTKMSKNINIVE
DMPEKTSLQKRWKALAMKFRGHIISYGCHASAVLVSPEDVCNWTAIEKQGDNMVVCHDFH
QLEAQGLLKLDILGLETLDIIEQTKHRAGIDIDVAKIPVDDKTTAAMLRKGDTTGCFQIE
SNVMTNIIIRMNVKNVEDMSAVVALGRPGPLDSGMAETFLRRRNHQEPTVYDIPELEPIL
RDTEGVILYQEQIMQIAQKICGYSLGEADNLRRIIGRKVVDEMKPAVDDMISRGVKNGYT
EAQMKRLTDNIITFASYGFNRGHSAAYGMTAWVTAYLKAHYPAAFMASLLDSNCKDKPKL
ASYILEAMHMGIKILPPQLSHYNCYSDYDEEGAYIILGLNCIAGVGNTQIPKDSPEDFKT
FLEANINMNKTVLSNLVKAGVFKGNRDEMLQYIVWAKDKRKSK
NT seq
2652 nt
NT seq
+upstream
nt +downstream
nt
atgttttctaacctacatactcataccgactatagcctgcatgatggatatgctaagatt
cccgatttagtgagcagagctaaagagcttgggtatccagcactggccatcacagaccat
gggactgtaacgggcttgattgatttctatgaagagtgtaagaaacagggtatcaaacct
atcctcggttgcgaattctattataccaatgaaatcaccgtaaaggaagctccgacatac
cacctcttgattctggccaaagataatgatggatataagaacatgatgaagatggatacc
tatgctcacgaacatttttatcggaagccaagaatcggaatcgaagccctcaaacagtat
catgaggggctcatctgcaccacagcctgcatcgccggtccactaagtgcttcagaacca
gaatccttgtacaataatttattagagatatttggtgacgatctgtatgtagaaatccag
cctcatgatttccaagaacagattgaatacaacgagaagtggaaggactatttccccagc
tcgaaaactatcgttacgttagacagccattacattgacaaggaagatatccaagctcat
aagttatggctcggtcttggcgacgattcccagtattacgcctctgacgactattacctt
cggagtgaggacgaagtactggactggttcaaaaaatatggtattgacgcaaagagttac
attgataatgtacaagaaatcgttgataaatgtaatgtagaaattgagtttggtggacag
cattaccccgtattctgtgatgacccagcaacctatgtaaaacagaaatgcaatgaagga
ttcaaggctttagggataagcaagtacccgaacaaagataagtacatcaagcaggtacgg
catgaattcaaaatcctgagtgaccttggatatctcaattatttctgcatcattgatgat
atgattcgtcattgtcgtgaagtcggtattccaacaggcctcggtcgtggttccgtagtc
ggtagcctgacagcgtacctcatgggaattacaaagttagaccccattaagtacaatctc
gtatttgaaagatttgcaaacccagaacgtgtaaccccagcagacatagacaccgatgtg
tccactccgagaagaggcgacgttatcgaatatgtaaaagagaaatatggggaagtatat
caggttcgtaccatcagctatgttcaagataaatcggctgtacaaagagccgcacaggcg
ataaacgggaaacattatctggatttaattagcgagtacaaaaagacagactcgtacaaa
aagaaggcggaagaaaatgaacgccttgctgaccacgatgccttcatagcgtgtagaaat
aaagaacttattaaacctgttgaatataccaaaatgagtaaaaacatcaacatagttgaa
gacatgccggagaagacttccctacaaaagagatggaaagctttggctatgaaattccgt
ggtcacatcatctcctatggatgccatgcgtcggcggtgttggtaagtccggaagatgta
tgtaactggacagcaatcgaaaaacaaggtgacaacatggttgtctgccacgatttccac
cagctggaagctcaggggttattgaaactcgatatccttggccttgaaactttggatatc
atcgaacagaccaagcaccgtgccggtattgacattgacgtagctaagattccagtagat
gacaagacaaccgccgctatgctccgcaagggtgatacaactggttgcttccagattgaa
tcaaatgttatgacaaatatcatcatcaggatgaatgttaagaatgtagaagacatgtca
gcagttgttgcgttaggaagaccgggtccgttagactctggaatggcagaaactttcctc
cgccgccgtaaccaccaagaacctaccgtgtatgatattccagaactcgaacctatcctt
agggatacggaaggtgtcattctgtatcaggaacaaatcatgcagattgctcagaagata
tgtggatattccctcggtgaagcagataatctccgtagaatcattggccgtaaggtagta
gatgaaatgaaaccggctgtagatgatatgatttcaagaggagtaaagaatggatacaca
gaagctcaaatgaaaagattgaccgataatatcatcacctttgcctcctatggcttcaat
agaggccattctgcggcttacggtatgacagcatgggttactgcctatttaaaggctcat
tatccagcggcgttcatggcttctttgttggattctaactgtaaggataaaccgaaacta
gcctcttatattcttgaagcaatgcatatgggaattaagattctccctccccagctttcc
cattataactgttactcggactacgacgaagaaggggcctatattattcttgggctgaac
tgtatcgctggagtaggcaacacacagattcccaaagattccccagaagacttcaaaacg
tttttggaagccaatatcaatatgaataagacagttttgagtaacttagtaaaagctggt
gtattcaaagggaacagagacgagatgctacaatatattgtgtgggcaaaagataaaaga
aaatcgaaatga
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