Megasphaera elsdenii: MELS_2145
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Entry
MELS_2145 CDS
T01633
Name
(GenBank) excinuclease ABC subunit A
KO
K03701
excinuclease ABC subunit A
Organism
med
Megasphaera elsdenii
Pathway
med03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
med00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
MELS_2145
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
med03400
]
MELS_2145
DNA repair and recombination proteins [BR:
med03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
MELS_2145
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
MELS_2145
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrA_inter
UvrA_DNA-bind
ABC_tran
SMC_N
RsgA_GTPase
AAA_29
AAA_16
AAA_21
AAA_23
nSTAND1
AAA_33
AAA_22
nSTAND3
AAA_25
DnaJ_CXXCXGXG
ATPase
Viral_helicase1
cobW
NACHT
BsuBI_PstI_RE_N
Motif
Other DBs
NCBI-ProteinID:
CCC74362
UniProt:
G0VMH0
LinkDB
All DBs
Position
complement(2372922..2375777)
Genome browser
AA seq
951 aa
AA seq
DB search
MEDKYIVIKGARQHNLKNIDVKIPRDKLVVFTGLSGSGKSSLAFDTIYAEGQRRYVESLS
AYARQFLGQMDKPDVDYIEGLSPAISIDQKTTSRNPRSTVGTVTEIYDYLRLLYARVGEA
YCPKCGKPIRQQTIEQMADAVMALGEGEKVMVMAPVVDGRKGTHQKLLAKLVKDGYVRVR
VDGEVYLLSDDIPLDKNKKHTIDVIIDRLVIKNSILTRLTDSLETAAKLADGIVHIFRMA
TKEVLTFSQHFACPDCHVSLPEIEPHLFSFNSPFGACPACSGIGSTMEVDARLVLPDRKK
SFADGAVAALSSNPDSWFMRQLGGLLRPYGFTLDNCYDDLPEELQEKLMDGSDDLCVFEY
ENLRGQVKQFSTTFEGVLPMVRRRYREASSDMMRDQFGQFMTVKPCSTCHGTRLRHEALA
IKIGGLNIAELTDLPVSDMIPFFDSLKLTEKQQLIGKQIFKEIKARLNFLQTVGLDYLTL
SRTAGTLSGGEAQRIRLATQIGSGLVGVLYILDEPSIGLHQRDNDKLLEALKRLRDLGNT
LIVVEHDEDTMRAADYIVDIGPAAGEHGGTIVAQGSAEDIMACSQSLTGQYLKGTKYIPV
PKVRRLGSGNFLEIIGAAEHNLKHINVSIPIGTLTVVTGVSGSGKSTLVNEILYKGMAEA
VYGTPHRPGKFKALKGVEYIDKIINIDQSPIGRTPRSNPATYTGVFDAIRQLYSQTAEAK
VRGYKAGRFSFNIKGGRCEACKGDGIIRIEMNFLPDVYVPCEVCHGARYNRETLEVKYKG
KNISDVLNMTVDDACQFFENIPRIVNKLKTLQQVGLGYIRLGQPATTLSGGEAQRVKLAT
ELSKRSTGRTLYILDEPTTGLHTADIHKLMDVLQMLVDGGDTVVVIEHNLDVIKTADYLI
DLGPEGGAGGGTVVATGTPEEICQVPASYTGKFLKPVLERTKALMAGEKGE
NT seq
2856 nt
NT seq
+upstream
nt +downstream
nt
atggaagataaatatattgtcattaaaggtgcgcgtcagcacaatttaaagaacatcgat
gtcaagattccccgggacaagctcgtcgtctttacgggcctgtccggttcgggcaagtcg
tccctggcttttgatacgatttacgccgaaggccagcgccgctatgtcgaatctctgtcg
gcctatgcccggcagttcctgggccagatggataagcctgatgtcgattacattgaaggc
ctgtcgccggctatttccatcgaccagaagacgacgagccgcaatccccggtcgaccgtc
gggacggttacggaaatctacgattacctgcgcctgctctatgcccgcgtcggcgaagcg
tattgcccgaaatgcggcaagcccatccgccagcagactatcgagcagatggccgatgct
gtcatggccctcggcgaaggcgaaaaggtcatggtcatggcccctgtcgtcgacggccgc
aaggggacccatcagaaactcctggccaaattggtcaaggacggctacgtccgcgtccgc
gtcgacggcgaagtctaccttttgtccgacgatattcccttggataagaataagaagcat
accatcgacgtcatcatcgaccgcctggtcatcaagaacagtatcttgacgcgcctgact
gattctttggaaacggcggctaaactggccgatggcatcgtccacattttccgtatggct
acgaaagaagtcctgactttcagtcagcatttcgcctgcccggactgccacgtcagcctg
ccggaaatcgaaccgcatctcttttctttcaacagtcccttcggggcctgcccggcctgc
tccggtatcggcagtaccatggaagtcgatgcccgcctcgttttgccggaccgcaagaaa
tcctttgccgacggcgctgtagcggctctcagcagtaatcccgattcgtggttcatgcgc
cagctcggcggtctcctgcggccttatggctttaccctggataattgttacgacgacttg
ccggaagaactgcaggaaaaactcatggacggttctgacgacctgtgcgtctttgaatat
gagaacctgcgcggccaggtaaagcagttctcgacgacttttgaaggcgtcctgcccatg
gtccgccgccgctaccgcgaggcttcatcggatatgatgcgcgaccagttcggacaattc
atgaccgtcaagccctgttcgacctgccatggcacgcgcctgcgccacgaagcgctggcc
atcaagataggcggcttgaacatcgctgaattgacggatttgcctgtcagcgatatgatt
cccttcttcgatagcttgaaattgacggaaaagcagcagctcattggcaaacagattttc
aaggaaatcaaggcccgcctgaatttcctgcagaccgtcggcctcgattatctcactctg
tcgcggacggccgggaccctgtctggcggcgaagcccagcgaatccgcctggcgacccag
atcggttcgggcctggtcggcgtcctctacatcctggacgaaccgtctatcggcctgcat
cagcgggataacgacaagctcctggaagccctcaagcgcctgcgcgacctgggcaataca
ctcatcgtcgtcgaacacgacgaagataccatgcgggctgccgattatatcgtcgatatc
ggtccggctgcaggggaacacggcggcaccatcgtcgcccaagggtcggccgaagatatc
atggcttgctctcagtcactgacgggccagtacctgaaggggaccaagtacattcccgtc
ccgaaagtacggcggctggggagtgggaactttttggaaatcatcggcgcagccgaacac
aatttaaaacatataaacgtgtccatccccatcgggaccctgactgtcgttacaggcgta
tccgggtcgggtaagtcgaccttggtcaatgaaatcctgtacaagggcatggctgaggcc
gtttacggaacgccgcaccggccgggcaagttcaaggccttgaaaggcgtcgaatacatc
gataagattatcaacatcgaccagtcgcctattggtcggacgccgcggtccaatccggcc
acgtatacgggcgtcttcgatgccatccgccagctctacagccagacggcagaagccaag
gtgcgcggctacaaagccggccggttcagcttcaatatcaaaggcggccgctgtgaagcc
tgcaagggtgacggcatcatccgcatcgaaatgaatttcctgccagatgtctacgttccc
tgcgaagtctgccacggtgcccgctataaccgggaaacgctggaagtcaaatacaagggc
aagaatatttccgacgtcctcaacatgaccgttgacgacgcctgccagttctttgaaaat
atcccgcgcatcgtcaataagttgaagacgctgcagcaggtcggcctgggctacatccgc
ctgggccagccggcgacgaccttatccggtggtgaagcccagcgggtcaaactggcgacg
gaactgtccaagcgcagtaccggccggaccctgtatatcctcgatgaaccgacgacgggc
ctgcacacggcggacatccacaagctcatggacgtcttgcagatgctcgttgacggcggc
gataccgtcgtcgtcatcgaacacaatctggacgtcatcaagacggcagactatctcatc
gacctcggtcccgaaggtggtgccggcggcgggaccgtcgtcgccacgggaacgccggaa
gaaatctgccaggtaccagcttcgtatacgggaaaattcctcaagcccgtcctggaacgc
accaaggccctcatggccggcgagaagggagaataa
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