Megasphaera elsdenii: MELS_2146
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Entry
MELS_2146 CDS
T01633
Name
(GenBank) UvrABC system protein B
KO
K03702
excinuclease ABC subunit B
Organism
med
Megasphaera elsdenii
Pathway
med03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
med00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
MELS_2146
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
med03400
]
MELS_2146
DNA repair and recombination proteins [BR:
med03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
MELS_2146
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
MELS_2146
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
UvrB
Helicase_C
ResIII
UVR
AAA_30
DEAD
AAA_22
UvrD-helicase
AAA_5
AAA_16
UB2H
AAA_25
T2SSE
TrwB_AAD_bind
N4_RNAP_helical
HEM4
SRP54
AAA_7
HH_RND_rel
RNA_helicase
DUF87
Motif
Other DBs
NCBI-ProteinID:
CCC74363
UniProt:
G0VMH1
LinkDB
All DBs
Position
complement(2375952..2378075)
Genome browser
AA seq
707 aa
AA seq
DB search
MDMSHYNKDYDTSHPFHVVAPYEPMGDQPEAIASLAEGVRSGQWAQVLVGATGTGKTFTM
AKLIEAVQKPTLVIAHNKTLAAQLCSEFKSFFPDNEVGYFVSYYDFYQPEAYIASTDTYI
EKDASINDEIDKLRHSATMSLFERRDVIIVASVSCIYGLGDPEDYSELVVSLRLGQEKSQ
EEILHKLVDIQYSRSDMNLERGTFRVHGDTIEVFPAAFDNSVIRIEMFGDEIDRLTEVDV
LTGEVIAERKHVAIYPASHYVTTKDKMERALGTIRQELDERLKVLKDGGHLLEAQRLEQR
TRYDMEMMEEMGYCSGIENYSRHLAGRKPGQAPYTLLDYFPDDFLILVDESHVTLPQLRA
MYAGDRSRKENLIEYGFRLPSALDNRPLKFEEFVERINQIVYVSATPGPYEMEVQTNLAQ
QIIRPTGLLDPNVEVRPIAGQMDDLLGEIRQRTEKDERVLVTTLTKKMAEDLTDYLKEMG
VRVRYLHSDIATIERADIIRDLRAGVFDVLVGINLLREGLDMPEVSLVAILDADKEGFLR
SETSLIQTMGRAARNVNGTVIMYADKITDSMAKAMEETQRRREIQDAYNKKHHITPKSVK
KDVVDLIELTKVAEDEAAYGSQKGKKGGKMTREALNKVIKTMTLQMKEASKNLEFEKAAE
LRDRLGELRQQLADMSHDDTLPKDMQGADMPKRRYRRKIKRPDAKRK
NT seq
2124 nt
NT seq
+upstream
nt +downstream
nt
atggatatgtcccattacaataaagattacgatacgtctcatccctttcacgtcgtcgcc
ccgtatgaaccgatgggcgatcagcccgaggccatcgcctccctggcggaaggcgtccgt
tccggccagtgggcccaggtcctcgtcggggctaccggtaccgggaagaccttcaccatg
gccaagctcatcgaagccgtccagaaaccgaccttggtcatcgctcacaacaagaccttg
gcagcccagttgtgcagcgaatttaaatccttctttcccgataatgaagtcggctacttt
gtcagctattatgacttctatcagcctgaagcctatattgcctcgacggatacgtatatc
gagaaagatgcgtccatcaacgatgaaatcgataaattgcgccactcggcgacgatgagt
ctctttgaacggcgcgatgtcatcatcgtcgcttccgtttcctgcatctatggcttaggt
gacccggaagattacagcgaactcgtcgtatccctgcgcctggggcaggaaaaatcgcag
gaagagatcttgcataagctcgtcgatatccagtacagccgcagcgacatgaacctcgaa
cgcgggactttccgcgtccacggcgatacgatcgaagtctttccggcggctttcgacaac
tccgtcatccgcatcgaaatgttcggcgacgaaatcgaccgcctgaccgaagtcgatgtc
ctgaccggcgaagtcattgccgaacgcaagcacgtcgccatctatccggccagccattat
gtcacgaccaaggacaagatggaacgggccttggggacgatccgtcaggaactggacgaa
cggctgaaagtgctgaaagacgggggccacttgctggaagcacagcgattggaacagcgc
acgcgctacgatatggaaatgatggaagaaatgggctattgctcaggcatcgaaaactat
tcgcgccatctggccggtcgcaagcccggtcaggcgccgtatacgcttctcgattatttc
cccgatgatttcctcatcctcgtcgacgaatcgcacgtcaccctgccccagctgcgggcc
atgtatgccggtgaccggtcgcgcaaagaaaacctcatcgaatacggtttccgcctgccg
tcggccttggacaaccggcctttgaaatttgaagaatttgtcgaacgcatcaatcagatc
gtctacgtcagcgctacgccagggccctatgaaatggaagtccagaccaatctggcccag
cagatcatcaggccgacgggcctgttggacccgaacgtggaagtccgtcccattgccggc
cagatggatgacctgttgggggaaatccgccagcgtacggaaaaggacgaacgcgtcctg
gtgacgacgctgaccaagaagatggccgaagatttgacggactacctgaaagaaatgggc
gtccgcgtgcgctatctccattcggatatcgctaccatcgaacgggccgacatcatccgc
gacctgcgggccggcgtcttcgacgtcctggtcggcatcaacctcctgcgcgaaggcctg
gatatgccggaagtctcgctggtagccatcctcgatgccgataaggaaggcttcctgcgg
tcggaaacgtcgctcattcagaccatgggccgggcagcgcggaacgtcaacggcacggtc
atcatgtatgccgacaagatcaccgattccatggccaaggctatggaagaaacccagcgc
cgccgggaaatccaggatgcttataataaaaaacatcatattacgccgaagtcggtcaaa
aaagacgtcgtcgacctcatcgaactgacgaaagtcgctgaagatgaagcggcctatggc
agccagaaagggaagaaaggcggcaagatgacccgcgaagccctgaataaggtcatcaag
accatgaccttgcagatgaaggaagcgtcgaagaatctggaatttgaaaaagcggcggag
ctgcgcgaccgcttaggggaactgcgccagcagctggccgacatgagccacgacgacacc
ctgcccaaagacatgcagggtgccgacatgcccaagcgccgctatcgccgcaagataaag
cggcctgacgcgaaaagaaaatag
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