Megasphaera elsdenii: MELS_2206
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Entry
MELS_2206 CDS
T01633
Name
(GenBank) exonuclease SbcCD
KO
K03546
DNA repair protein SbcC/Rad50
Organism
med
Megasphaera elsdenii
Brite
KEGG Orthology (KO) [BR:
med00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
med03400
]
MELS_2206
DNA repair and recombination proteins [BR:
med03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
MELS_2206
Archaeal homologous recombinant proteins
MELS_2206
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
SMC_N
AAA_29
AAA_27
nSTAND_NTPase5
nSTAND3
AAA_21
ABC_tran
ATPase_2
ABC_ATPase
AAA
Motif
Other DBs
NCBI-ProteinID:
CCC74423
UniProt:
G0VMN1
LinkDB
All DBs
Position
complement(2440294..2443338)
Genome browser
AA seq
1014 aa
AA seq
DB search
MIPIYLDMKAFGPYAGREIVDFRQLGDHKLFLIYGPTGSGKTTILDAMCYALYGSTSGDS
RTGAHMRSEYASPQEATSVSFRFAIGQKYYRIDRSPEQEIAKKRGTGLKKASAQAALYET
DEAGDQEKLIAAKNVTAAVEGLLGFKADQFRQVVLLPQGDFRKLLLAGSGERQQIMQTLF
HTQRYARLQELAKARHDALASQYEQVRQRREQCLAALDIADEKELPAKERQWQDQAVAVD
KQWQEAEGTRKTCQAAFQAAQALDAHWLLRDQKRREAAQLQAQARQFQEKRDTIATLRQA
EILAEPCRHLDDLEREGREAHKAAEKAGKLAEKARQDLTAAKQQLEGLSAREKGYKAACE
EQVQLAGLQDKAGAYRTCCLEEGQCQKNVTDAEKRWNQARKKKEKEKQALDKAREAVAGL
AEQAVAAEQAKARWQALNDRIQREGEAAELEAKAKEAQKQWQHSRTFLEKAAAKARDERI
AYESVRALFLQAQAAVLASELEEGQPCPVCGSKAHPLPAVRPESLPERHDVEQHQKRAEA
SEGKRQQWEVTAKADETRCQALQAQYEALRRQYPQDGTLADWQAKAGQAQVAMEGLQQQV
RDGEKLKQAVAAGEARLARWEKDEETARTAVEQARTAAAKAAETKARLEADLPAAYRDPL
ALQQRLDALNRAIRIYEKDLQHCRDAVVAGERQAAKQQQEARNWQHQVEVLRDRFSQGVQ
ALRDRVLAAGFESVKACRAMQAAVPQIPGLEESVRHYDQQVQQVQGQLAQEEAAIGTQER
PDVAAARTALDGAEKASQALVEAKGSLTARYQRWQQEKEALAALQQEGQDLTEAYKTVGA
VYELIAGKQTGINFERYVLGALLDEVLAAANGRLQGMSRQRYSLQRSQSWDDKRVKQIGL
DIEVYDNYTGYARPANTLSGGETFLASLSLALGLADVVQAYSGGIHLDTMFIDEGFGTLD
GETLDYALKTLASLRNGGRLVGIISHVPELKERIDARLAVHKTDRGSTSSFEFA
NT seq
3045 nt
NT seq
+upstream
nt +downstream
nt
atgattcccatttacttagacatgaaggcttttggtccctatgctggccgggaaatcgtc
gatttccgccaattaggggaccacaaactgttcctcatctacgggccgacaggctcgggc
aagacgaccatcctcgacgccatgtgctacgccctctacggcagcaccagcggcgacagc
cgtaccggcgcccacatgcgcagcgagtacgcttcgccgcaggaagcgacgtccgtatcg
ttccgctttgccatcggccagaaatattaccgcatcgaccgcagcccggaacaggaaatc
gccaagaaacgcggcacgggcttgaaaaaggcttcggcccaggccgctttatacgaaacg
gatgaagccggggaccaggaaaagctcatcgccgccaagaatgtgacggctgccgtcgaa
gggctgctgggctttaaagccgaccagttccgccaggtcgtccttttaccgcagggggac
ttccgcaagctcctcctggccgggtccggcgaacgccagcagatcatgcagaccctcttc
catacccagcgctatgcccggctccaggaactggccaaagcccgccacgatgccttggcc
agccagtacgaacaggtgcggcagcggcgggagcagtgcctggcggcgctggacattgcc
gacgaaaaggaactgcctgcaaaggaacggcaatggcaggaccaggcagtggccgtagac
aaacagtggcaggaagccgaagggacgcgcaagacctgtcaggccgctttccaggccgcc
caggccctggacgcccactggctgctgcgggaccagaaacgccgggaagcggcgcagctc
caggcgcaggcccggcagttccaggaaaagagggataccatcgctaccctgcgccaggcc
gaaatcctggccgaaccctgccgccacctggacgacctggaaagagagggcagggaggcc
cataaagccgctgaaaaagcaggaaaactggccgaaaaggcccggcaggacctaactgcg
gccaagcagcagctggaaggtctttcggcccgggaaaagggctataaggcggcctgtgaa
gaacaggtgcagctggcaggcctgcaggacaaggccggagcctatcggacctgctgcctc
gaagaagggcagtgccagaaaaacgtgactgacgccgaaaagcgctggaaccaggcccga
aagaaaaaagaaaaggaaaagcaggccctggacaaggcccgggaagccgtcgccggtctg
gccgaacaagccgtcgcggcggaacaggccaaagcccgctggcaggccctgaacgaccgg
atccagcgcgaaggcgaagcggctgagctggaagctaaggctaaagaagcgcagaaacag
tggcagcacagccggacctttctggaaaaagcggcggccaaagcccgggacgaacgcatt
gcctatgaaagcgtccgggccctgttcctgcaggcccaggcagctgtcctggcgtcggaa
ctggaagagggccagccctgcccggtctgcggttcgaaagcccatcccctgccggctgtg
cgcccggaatccctgccggaacggcacgacgtcgaacagcatcagaaacgggccgaagcc
agtgaaggcaagcgccagcagtgggaagtgacagccaaagccgatgaaacccgctgccag
gccctgcaggcccagtacgaggccctgcgccgccagtatccccaggacgggaccctggcg
gactggcaggccaaggccggacaggctcaagtggctatggaaggcttgcagcagcaggtc
cgggacggtgaaaagctgaaacaagccgtcgccgccggcgaggccagactggcccgctgg
gaaaaggacgaagaaacggcccggacggccgtggaacaggcgaggaccgctgcggctaaa
gccgctgagacgaaggcccgcctggaagcggacctgccggcagcctatcgagacccgctg
gcgttgcagcagcgactggatgccttgaaccgcgctatcaggatctatgaaaaggacttg
cagcactgccgcgacgccgtcgtcgccggcgaacggcaggcggccaagcagcagcaggaa
gcgcggaactggcagcatcaggtcgaagtgctgcgggaccgcttcagccagggcgtccag
gccctgcgggaccgcgtcctggccgccggctttgaaagcgtcaaggcctgccgggccatg
caggccgccgtgccgcagataccgggactggaagaatccgtccggcactatgaccagcag
gtccagcaggtccagggccagctggcccaggaagaggccgccatcggcacacaggaacgg
cccgacgtggccgccgcccggacggccctggacggcgctgaaaaggccagccaggccctg
gtcgaagccaagggcagcctgacggcacggtaccagcgctggcagcaggaaaaggaagcc
ctggccgctttgcagcaggaaggccaggacctgaccgaagcctataagaccgtcggcgcc
gtctatgaactcattgccggcaagcagacgggcatcaactttgaacgctacgtcctcggg
gccctcctcgatgaagtcctggccgccgccaacgggcgcctccagggcatgagccgccag
cggtacagcctgcagcgctcccagtcctgggacgacaagcgggtcaagcagatcggcctg
gatatcgaagtctatgacaattatacgggctatgcccgtccggccaacaccttgtccggc
ggcgagaccttcctggcctccctgtccctggccctgggcctggccgacgtcgttcaggcc
tattctggcggcattcacttggatacgatgttcatcgatgaaggcttcggtaccctcgac
ggcgaaaccttggattacgccttgaagacgttggcgtccctgcgcaacggcggccgcctg
gtcggcatcatttctcacgtccccgaactgaaggaacgtatcgatgcccgcctggccgtt
cacaagaccgaccggggtagtacgtcgtcctttgagtttgcttga
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