Methylocapsa sp. D3K7: QEV83_01195
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Entry
QEV83_01195 CDS
T08996
Name
(GenBank) ATP-dependent helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
medk
Methylocapsa sp. D3K7
Pathway
medk03420
Nucleotide excision repair
medk03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
medk00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
QEV83_01195
03430 Mismatch repair
QEV83_01195
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
medk03400
]
QEV83_01195
Enzymes [BR:
medk01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
QEV83_01195
DNA repair and recombination proteins [BR:
medk03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
QEV83_01195
MMR (mismatch excision repair)
Other MMR factors
QEV83_01195
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
Viral_helicase1
AAA_30
AAA_12
RecR_HhH
Motif
Other DBs
NCBI-ProteinID:
WGJ14960
LinkDB
All DBs
Position
280141..282213
Genome browser
AA seq
690 aa
AA seq
DB search
MSAAYLDKLNPEQRRAVEHGVRDKPCAPCAPLLVIAGAGSGKTNTLAHRVAHLIVKGADP
RRILLMTFSRRAATEMTRRVERITRQVMGDRAGVLTDSLTWAGTFHGIGARLLRDYAGQI
GLDPSFTIHDREDSADLMNLVRHELGFSKTKSRFPMKGTCLAIYSRCVNAELVIDDVLKT
SFPWCAAWAAELRGLFVAYVEAKQRQNVLDYDDLLLYWAQTVSDRGLADDIGGRFDHVLV
DEYQDTNRLQSSILLALKPDGRGLTVVGDDAQSIYSFRAATVRNILDFPRQFSPEAEIIT
LDRNYRSTRPILAAANGVIDLAAERFTKNLWTDRNSAERPHLINVRDEAGQAAYVVECVL
ENREGGSALKQQAILFRASHHSGPLEVELTRRNIPFVKFGGLKFLEAAHIKDLLALLRFV
ENPRDRVAGFRVLQMMPGVGSASAQRVLDHMMASVNPIQALIDAPPPPRAGDNWISFVTT
VTDLHAGSAGWPAELERARLWYEPHLERIHEDAVTRRADLMQLEQIACGYPSRERFLTEL
TLDPPDATSDQAGVPLLDEDYLILSTIHSAKGQEWKSVFVLNVVDGCIPSDLGTGTTAEI
EEERRLLYVAMTRAKDNLHLITPQRFFTHGQSAQGDRHVYAARTRFIPDGLLSLFNKTAW
PVIAAGSASVRGSSQGMRVDVGARMRGMWR
NT seq
2073 nt
NT seq
+upstream
nt +downstream
nt
atgtccgcggcctatctcgataagctcaatcccgaacagcgacgcgccgtcgagcatggc
gtgcgcgataagccatgcgcgccctgtgccccgctcctcgtgatcgccggggcgggctcg
ggcaagaccaacacgctcgcccatcgcgtcgcgcatttgatcgtcaaaggtgccgatcca
cgccgaatcctcttgatgacattctcaaggcgcgcggcgaccgagatgacgcggcgcgtc
gagcggatcacccgccaggtgatgggggatcgcgctggcgttttgacagactcgctcacc
tgggcggggacgttccacgggatcggcgcgcggctgttgcgcgactatgccggccagatt
gggctcgatccgtcgttcacaatccatgatcgcgaggattccgccgatctgatgaatctg
gtccggcatgagcttggtttctcgaagaccaagagccgatttccgatgaaaggcacctgc
cttgcgatctactcgcgctgtgtgaacgcggaactcgtgatcgatgacgtactgaagact
tcttttccctggtgcgccgcctgggcggccgagctgcgcggactcttcgtagcctatgtg
gaagccaagcaacgccagaatgtcctcgattacgatgatcttttgctctactgggcgcag
actgtgagcgaccgaggcctcgccgacgatatcggcgggcggttcgaccatgtcctcgtc
gacgaatatcaagacaccaaccgcctccagtcatcgatcctgctggcactaaaacccgat
ggacgcggactcaccgtcgtcggggatgacgcgcagtcgatctattcgtttcgcgccgca
accgtccggaacattctcgacttccctcgtcagttttctcctgaagcagaaatcatcacg
ctcgatcgcaattatcgttcgacgcgaccgattctcgcggccgccaacggcgtcatcgat
ctggcggccgagcgcttcaccaagaatctttggaccgaccggaattcggccgaacgcccg
cacctcatcaacgtccgcgacgaggccggccaggccgcctatgtcgtcgaatgcgtcttg
gagaaccgcgagggtggttcggcgctgaagcagcaggcgattttgttccgggcctcgcat
cacagtgggcccctcgaagtggaactgacccgccgcaatattcccttcgtgaagtttggc
ggcctcaaattcctggaggctgcccatatcaaggatctgctggcgcttctgcgtttcgtc
gagaacccgcgcgatcgcgtcgcaggcttccgggtgctgcagatgatgcccggcgtcgga
tcggcttcggcacagcgcgtgctcgaccacatgatggcctcggtgaatccgattcaagca
ctcatcgatgcacctccaccgccccgcgccggcgacaactggatatcctttgtcacgact
gtcaccgacctgcacgccggcagcgccggctggcccgccgaacttgagcgcgcacgcctc
tggtacgaaccgcatctcgagcgcattcacgaggatgccgtcacgcggcgcgccgatctc
atgcaactcgagcagatcgcttgcggctatccctcgcgcgagcggttcttgacggagctc
acgctcgatccgccggacgcgacgagcgatcaggcaggcgtgccactgctcgacgaggat
tatctgatcctttcgacgatccattcggccaagggccaagaatggaaatcggttttcgtg
ctcaatgtcgtcgacggctgcatcccgtccgatcttggcaccggcacaacggccgagatc
gaagaggagcgccgcctgctctatgtcgcaatgacacgtgccaaggacaatttgcatctc
attaccccgcagcgcttctttacgcacggccaaagtgcgcaaggggaccggcacgtttac
gccgcgaggacgcgcttcattccggacgggttgttgagcctgttcaacaagacggcttgg
ccggtgatcgcagccggatcggcaagcgtgcgaggctcaagccagggcatgcgcgtcgat
gtcggcgcccgcatgcgcggcatgtggcgatga
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