Methylocapsa sp. D3K7: QEV83_04895
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Entry
QEV83_04895 CDS
T08996
Symbol
murD
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase
KO
K01925
UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:
6.3.2.9
]
Organism
medk
Methylocapsa sp. D3K7
Pathway
medk00470
D-Amino acid metabolism
medk00550
Peptidoglycan biosynthesis
medk01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
medk00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
QEV83_04895 (murD)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
QEV83_04895 (murD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
medk01011
]
QEV83_04895 (murD)
Enzymes [BR:
medk01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.9 UDP-N-acetylmuramoyl-L-alanine---D-glutamate ligase
QEV83_04895 (murD)
Peptidoglycan biosynthesis and degradation proteins [BR:
medk01011
]
Precursor biosynthesis
Amino acid ligase
QEV83_04895 (murD)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
MurD-like_N
Mur_ligase_C
2-Hacid_dh_C
Semialdhyde_dh
ApbA
Motif
Other DBs
NCBI-ProteinID:
WGJ15610
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All DBs
Position
complement(1072540..1073934)
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AA seq
464 aa
AA seq
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MTPVTCFESKHAAVFGLGGSGFITAQALAAGGARVSVWDDNEHARENARAAGLRIENLAA
VDWRNFDSLVLSPGVPLTHPAPHWTVLKAKQAGIEIIGDIELFCRERQKTAPGSPFVAIT
GTNGKSTTTALVAHLYKSFGFAVEAGGNIGTPILALERPAPERVHVVECSSFQIDLAPSL
NPSAGVLLNVTPDHLDRHGTMENYAAIKARLVEKADLAVVGIDDDISRAIANRLIKSGKR
VIRVSVNNTPVEDSIVLDGTCLLRYYGGRSAPIADLAGIASLRGKHNGQNAAAAVAALGP
LGLDTERVAKCLRSFPGLPHRLEEVAHEGNVLFVNDSKATNADAAEKALLSFDKVFWIIG
GRAKEGGIEPLRPLFGKVIKAYLIGESSDVFARTIGEAFPYERCGSLEAAVPAAARDAFA
SKIAEPVVLLSPACASFDQFPDFEKRGDRFRDLVKALLADKKAS
NT seq
1395 nt
NT seq
+upstream
nt +downstream
nt
atgacgccggtcacttgcttcgagagtaagcacgccgccgtgtttggcctcggtggctcc
gggttcatcactgcgcaagcgcttgccgccggcggtgctcgcgtgtcggtctgggacgac
aatgaacatgcccgcgagaatgcccgcgcggcggggctgaggatcgaaaatcttgcggcc
gtggactggcggaattttgattcgcttgttctttctcccggggttccgttgacgcatccg
gcgcctcattggacggtccttaaggcaaagcaagccgggattgaaatcatcggcgacatc
gaattgttttgccgcgaacgccagaaaaccgcgccaggctcgccctttgtggctatcacc
gggacgaacggaaagtccacaaccacagcgcttgttgcgcatctctacaagagtttcgga
tttgccgttgaagccggcggcaatatcggcactcccattctcgcgttggaaaggccggcg
ccggaacgcgtccacgtcgttgagtgctcatcctttcaaatcgatcttgcgccatccctc
aatccgtccgccggtgtccttttgaatgtcacgccagatcaccttgaccggcatggcacg
atggaaaattacgcagcgatcaaggcgcgactggtcgaaaaagccgatctcgcggttgtc
ggaatcgacgatgacatttcgcgtgccatcgccaataggctgatcaaatcggggaaacgg
gtcattcgcgtttccgtgaacaacacgccggttgaagacagtattgtcctcgatggaacg
tgtcttttgcgttattacggtggccgttcggcgccgattgcggatttggccggaattgct
tcgctgcgcggaaaacacaatggccagaatgccgccgccgctgtcgctgcgcttgggccg
cttggtcttgatacggagcgtgtcgcaaagtgcctgcggagttttcccgggctgccgcac
cgtttggaagaagtggcgcacgaaggtaatgtactgtttgtcaacgattccaaagcgacc
aatgccgatgccgccgaaaaagcattgctctccttcgacaaggtgttttggattatcggc
ggccgggcgaaagagggcggcatcgagccgctgcggcctttgttcgggaaagtgatcaaa
gcctatctgattggcgaatccagcgatgttttcgcgcgaaccatcggagaggcttttccc
tatgagcgctgcgggtcactcgaagccgcagttcccgcggcggcgcgcgatgcttttgca
agcaagattgccgaacctgtcgtcctgctttcgcctgcctgcgcgtccttcgaccaattt
ccagatttcgaaaaaagaggcgatcgctttcgcgatctcgtcaaggctttgctcgcggac
aaaaaagcgagttga
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