Methylocapsa sp. D3K7: QEV83_05250
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Entry
QEV83_05250 CDS
T08996
Name
(GenBank) integration host factor subunit beta
KO
K05788
integration host factor subunit beta
Organism
medk
Methylocapsa sp. D3K7
Brite
KEGG Orthology (KO) [BR:
medk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
medk03032
]
QEV83_05250
03036 Chromosome and associated proteins [BR:
medk03036
]
QEV83_05250
03400 DNA repair and recombination proteins [BR:
medk03400
]
QEV83_05250
DNA replication proteins [BR:
medk03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
QEV83_05250
Chromosome and associated proteins [BR:
medk03036
]
Prokaryotic type
Nucleoid associated proteins
IHF (integration host factor)
QEV83_05250
DNA repair and recombination proteins [BR:
medk03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
QEV83_05250
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_euk_1
HU-CCDC81_euk_2
HU-CCDC81_bac_2
HU-CCDC81_bac_1
Motif
Other DBs
NCBI-ProteinID:
WGJ15671
LinkDB
All DBs
Position
complement(1140922..1141212)
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AA seq
96 aa
AA seq
DB search
MIKSELVQRIANRNPHLYLRDVEKIVNAILDEITNALSRGDRVELRGFGAFSVKHRDARV
GRNPRTGAHVPVNEKTVPFFKTGKEMRERLNKTQGI
NT seq
291 nt
NT seq
+upstream
nt +downstream
nt
atgatcaaatccgagcttgtacagcggattgccaatcgtaatccgcatctttaccttcgc
gacgtcgagaaaatcgtcaatgctattcttgatgagatcacgaatgcgctatctcgaggc
gatcgtgtcgaattgcgcggatttggggctttctccgtcaaacaccgggatgcgagagtc
ggccgcaacccgcgcacgggagcgcatgtgccggtgaacgaaaagaccgttccatttttt
aagaccggcaaggaaatgcgggaacgcttaaataagactcagggtatctga
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