Methylocapsa sp. D3K7: QEV83_05965 Help Entry QEV83_05965       CDS       T08996                                  Name (GenBank) ribonuclease J   KO K12574   ribonuclease J [EC:3.1.-.-] Organism medk  Methylocapsa sp. D3K7 Pathway medk03018   RNA degradation Brite KEGG Orthology (KO) [BR:medk00001]  09120 Genetic Information Processing   09123 Folding, sorting and degradation    03018 RNA degradation     QEV83_05965  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:medk03019]     QEV83_05965 Messenger RNA biogenesis [BR:medk03019]  Prokaryotic type   Bacterial mRNA degradation factors    RNA degradosome components     Ribonucreases      QEV83_05965 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  RNase_J_b_CASP Lactamase_B RNase_J_C Lactamase_B_2 RMMBL Anti-Pycsar_Apyc1 Motif Other DBs NCBI-ProteinID:  WGJ15803 LinkDB All DBs Position complement(1321818..1323488) Genome browser AA seq 556 aa AA seqDB search MNDGSDELVFVPLGGLGEIGMNLALYGFGYKGRIKWLMVDCGVAFAGPDLPGIDIVVPDI SFIEKMRDDLAGLVITHAHEDHIGAVADLWPRLGCTLYATPFAASLLEAKRLAEPGAPDV PITVVAQGASVAIGPFDVEFIAMAHSIPESCALAIRTPLGTVLHSGDWKIDAAPGIGKPT DAKRLAAIGAEGVLALISDSTNILREGVSPSEADVAKTLHEIIGQASGRVVVTTFASNVA RIRAVAEAAAAAGRSVVMAGRAMERVTAVARECGYLNGIGGFLTQEAFAHIPRDKVVLLA TGSQGEPRAAIARMSEGTHPAVSLNAGDQVIFSSRTIPGNEREVGRIINNFIRSGIEVIV DRNALVHASGHPRRGEVAQLYGWIKPQIAIPAHGEDVHLAEHAAFAKLQGAQHVITARNG DIVVLAPGTPGIVGEAQSGRFYKDGNCYVAANDEAIRMRQKLAVSGIVTIAMAVTAKGDL AGVPDVITAGLPARVGSGAAIDQIVDDALFQTFDNLPRPKRRDADVVSIAVEKAVRGAVA AAWGKRPVVHVLVVEV NT seq 1671 nt NT seq  +upstreamnt  +downstreamnt atgaacgatggaagtgacgagctcgtctttgtgccgctcggaggcctgggcgaaatcggc atgaacctcgccctatatggcttcggctacaaggggcgcatcaaatggttgatggtcgat tgcggcgttgccttcgcgggccccgatcttcccggaatcgatattgtggttccagatatc agctttatcgagaagatgcgggacgatttggccggcctcgtcattacccatgcgcatgaa gaccatatcggcgcggttgccgatctatggccacggcttggttgtacgctctacgcgacg cccttcgcggcttcattgctagaagcgaagcgactcgccgagccaggggctccggacgtg ccgattaccgtcgtcgcgcaaggagcgtcggtcgccatcggccctttcgatgtcgaattc atcgccatggcgcattcgattccggaaagctgcgcgctagccatccgcacgcctctcggc acggttcttcattcgggcgattggaaaatcgatgcagcccccggaattggcaagccgacc gacgcgaagcggcttgccgccatcggggcggagggcgtgctggcacttatctccgattcg accaatatattgcgcgagggggtcagcccctcggaagcggacgtcgccaagactttgcat gaaatcattggccaggcatccgggcgtgtcgttgtcaccaccttcgcgtccaatgtcgcg cgcatacgcgcggttgccgaggcggcggcggcggcgggccgttcggtcgtgatggcgggg cgggcgatggagcgggtcaccgccgttgctcgcgaatgcggttatcttaatggcatcggc gggtttttaacgcaggaggcattcgcccatatcccccgtgacaaggtggtcttattggca accggaagccaaggtgagccccgtgccgcgattgcccgcatgtcggagggcactcacccc gccgtcagtctcaacgcgggcgaccaggttatcttttcctcgcgaacgattccaggaaat gaaagggaagtcgggcgtatcatcaacaatttcattcgctcgggcatcgaagtcatcgtg gaccgcaacgcgctcgtccacgcctcggggcatccgcgccgcggcgaggttgcgcagctt tacggctggatcaaaccgcagatcgcgatcccagcgcatggcgaggacgtccatctcgcc gaacacgcggccttcgccaaattgcaaggcgcgcaacatgtcatcacggcccgcaatggg gatattgtcgtcctcgcgccgggaacccctgggatcgtgggcgaggcgcagagcggacgc ttctacaaagatggcaattgctatgtcgcggcgaatgacgaagctatcagaatgcgccag aagctcgcggtgtccgggatcgtgaccattgccatggccgtcaccgcgaaaggcgatctc gcgggggtgcctgacgtgatcacagctggcttgccggcccgcgtcggcagcggcgctgcg atcgatcagatcgtcgatgacgcattgtttcaaaccttcgataatttgccgcgtccgaag cggcgagacgcggatgttgtctccatcgcggtggaaaaagcggtgcgcggcgcggtcgcc gccgcctggggcaagcggccggtcgtccatgtgcttgtcgtcgaggtgtga

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