Methylocapsa sp. D3K7: QEV83_07705
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Entry
QEV83_07705 CDS
T08996
Symbol
fadB
Name
(GenBank) fatty acid oxidation complex subunit alpha FadB
KO
K01825
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
5.3.3.8
]
Organism
medk
Methylocapsa sp. D3K7
Pathway
medk00071
Fatty acid degradation
medk00280
Valine, leucine and isoleucine degradation
medk00310
Lysine degradation
medk00362
Benzoate degradation
medk00380
Tryptophan metabolism
medk00410
beta-Alanine metabolism
medk00640
Propanoate metabolism
medk00650
Butanoate metabolism
medk00907
Pinene, camphor and geraniol degradation
medk00930
Caprolactam degradation
medk01100
Metabolic pathways
medk01110
Biosynthesis of secondary metabolites
medk01120
Microbial metabolism in diverse environments
medk01200
Carbon metabolism
medk01212
Fatty acid metabolism
Brite
KEGG Orthology (KO) [BR:
medk00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
QEV83_07705 (fadB)
00650 Butanoate metabolism
QEV83_07705 (fadB)
09103 Lipid metabolism
00071 Fatty acid degradation
QEV83_07705 (fadB)
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
QEV83_07705 (fadB)
00310 Lysine degradation
QEV83_07705 (fadB)
00380 Tryptophan metabolism
QEV83_07705 (fadB)
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
QEV83_07705 (fadB)
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
QEV83_07705 (fadB)
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
QEV83_07705 (fadB)
00930 Caprolactam degradation
QEV83_07705 (fadB)
Enzymes [BR:
medk01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
QEV83_07705 (fadB)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
QEV83_07705 (fadB)
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
QEV83_07705 (fadB)
5.3 Intramolecular oxidoreductases
5.3.3 Transposing C=C bonds
5.3.3.8 Delta3-Delta2-enoyl-CoA isomerase
QEV83_07705 (fadB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
3HCDH
ECH_1
ECH_2
NfeD1b_N
Motif
Other DBs
NCBI-ProteinID:
WGJ16118
LinkDB
All DBs
Position
1692270..1694420
Genome browser
AA seq
716 aa
AA seq
DB search
MLFDGQTIKADILDGRIAELRFERGTEAVNKLDSLTFGELSLALDSIAATSAIKGVLITS
AKETFIVGADIFEFTHIFKHPEAEIEAFVARNSAIITALADLPVPTVAAINGLALGGGFE
LALAADYRIMSNAAKVGFPEITLGLFPGYGGTVRLPRLAGLATSVDWIISGAQQSPDKAV
LAGVADAIAAPDILRFAALAVLERAISGESDWQAKRARLKQRLGVSRDEAATLLAPAKAQ
AVKALPHFPAAHAAVDLLERAADLDRDTALELEAQIFAKIAKTQAADSLVAIFVNDQAVK
KSIRRYAKDAPPVRKAAVAGAGIMGGGIAYQSASRGVPIIMKDIAAPALDLGMGEARKLL
AKSVETGRLSQEKADVILASITPNLTYEGFDTADVVIEAVVEKIGVKHTVLREIEELTRP
STILASNTSSLLIGALAENLRRPENFLGMHFFNPVPKMPLVEVVRGPKTSPQAIAAVMGY
AAAMGKTPIMVEDCPGFVVNRVLTPYLIAFLRLVHDGVDFVAIDKAMEAFGWPMGPAYLI
DVIGMDISHHVVEIVSAGFAPRMDVSFETAIDILLRAGRLGQKSGHGFYKYEADSKGRPR
KNIDPDTERLLAPIQPNGKTSLTEEEIVSRMMLPLILEAARCVEDKIAASPGDVDMCLLL
GLGLPRYLGGALKYADHLGLNTVVESAEKWVSLGPIYRPSERLQARAAAGDVFYPL
NT seq
2151 nt
NT seq
+upstream
nt +downstream
nt
atgcttttcgatggtcaaacgatcaaagccgatatcctcgacgggcgcatagccgaactg
cgctttgagcgcggcactgaggcggtcaataagctcgactctctgacgtttggggaatta
agcctcgcgctcgattcgattgccgccacctccgcgatcaaaggcgttttgatcaccagc
gccaaggagacgttcatcgtcggcgccgatattttcgaattcactcatatcttcaagcat
ccggaggccgaaattgaagccttcgttgccagaaacagcgccattatcacggcgcttgcc
gatctgccggtgccgacggtagcagcgatcaatggcctcgcactaggcggcggttttgaa
ctcgcactcgccgccgactaccggatcatgtccaacgccgccaaagtcggttttccggag
atcaccctcggcctctttcccggctatggcggcaccgtccgcctgccccgccttgccggc
ctcgcgacaagcgtggattggatcatttctggagcgcagcaaagtcccgataaagccgtt
ctcgcgggtgtggccgacgccattgccgcgccggacatcttgcgttttgccgccctagcg
gtgctggagcgggcgatcagcggcgaatccgattggcaagccaagcgcgcccgcctgaag
caaagacttggagtaagccgggacgaggcggcaaccctgcttgccccggcgaaggcgcaa
gccgtcaaggcgcttccgcattttcctgcagcccatgccgcggtggacttgctggaacga
gccgctgaccttgatcgcgataccgccctggagctcgaagcgcagatttttgccaagatc
gcaaagacccaagcggcggactcgctcgtggcgattttcgtcaacgatcaggcggtgaaa
aagagcatccgccgctatgccaaggacgcgccgcctgtccgcaaagcggcggtcgcggga
gctgggatcatgggcggcggcattgcctatcagagcgcctcgcgcggcgtgccgatcatc
atgaaggacatcgccgcccccgcgctcgacctcggcatgggggaagcgcgcaaactgctc
gccaaatcggtggagacgggacggctcagccaagagaaggccgatgtgatccttgcttcc
atcacgccaaacctcacctatgaggggttcgacacagccgatgtggtgatcgaagcggtc
gtcgaaaaaatcggcgtcaaacacacggtgctgcgggaaatcgaggaactgacgcgcccc
agtacgatcctcgcctcgaacacctcgtcattgttgatcggcgccttggccgaaaatttg
cggcgcccggaaaattttctaggcatgcattttttcaatcccgtgcccaaaatgcccctc
gtcgaagtcgtgcgcggtcccaaaacatcgccgcaagccatcgcggctgtcatgggctat
gccgccgcgatgggcaagacgccgatcatggtcgaggattgcccgggctttgtcgtcaac
cgcgtgctcacgccctatcttatcgcgtttctgcggctcgttcatgacggcgttgatttc
gtcgccattgataaagccatggaagctttcggctggccgatgggacccgcttatctcatc
gacgtcatcggcatggatatttcccatcatgtcgtcgaaatcgtctcggcgggttttgcc
ccgcgcatggatgtctctttcgaaacggcgatcgatattctcttgcgcgccggccgcctc
ggccagaaaagtggccatggcttttacaaatatgaggccgattcgaagggccgtccgcgc
aagaatatcgaccctgacacggaacgtcttctcgcgcccatacaacccaatggcaaaacc
agcttgaccgaggaagagatcgtttcccgcatgatgctgcccttgattctggaggcggcg
cgttgcgtcgaggacaaaatcgcggcctcgccaggggatgtggatatgtgccttctcctt
ggcctcggtctgccgcgctatctcggcggcgctctcaaatatgccgatcaccttggtctc
aacactgtcgtggaaagtgccgagaaatgggtgagccttggacctatttatcgcccgagc
gaacgcttgcaggccagggccgcggcgggagacgtgttttatcccctataa
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