Methylocapsa sp. D3K7: QEV83_09650
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Entry
QEV83_09650 CDS
T08996
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
medk
Methylocapsa sp. D3K7
Pathway
medk03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
medk00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
QEV83_09650 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
medk03019
]
QEV83_09650 (recQ)
03400 DNA repair and recombination proteins [BR:
medk03400
]
QEV83_09650 (recQ)
Enzymes [BR:
medk01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
QEV83_09650 (recQ)
Messenger RNA biogenesis [BR:
medk03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
QEV83_09650 (recQ)
DNA repair and recombination proteins [BR:
medk03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
QEV83_09650 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
RQC
HRDC
Helicase_C
RecQ_Zn_bind
ResIII
HHH
DUF3352
Motif
Other DBs
NCBI-ProteinID:
WGJ12998
LinkDB
All DBs
Position
complement(2103942..2105903)
Genome browser
AA seq
653 aa
AA seq
DB search
MGTFDVTVLEQIALEDLRNGDAVNAHIDEAKEALTRVFGFTEFRPGQEEILKAVFAGEHI
LAVMPTGAGKSLLYQLPAIVRRGLTVVVSPLIALMRDQVQQLQARGIAAAALNSSNSGED
NSEIEAGLRRRRYRILYVAPERLARADTAELLRAAGADVFAIDEAHCVSQWGHDFRPEYL
SLAEVARAIGHVQLIAVTATADEPTRADIVKKLFAVPPQIFVRSFDRPNLHLSMARKTDA
TRQIESMIARHKGHSGIIYCNSRKGVEKLAEYLGQKGVLALAYHAGLEAGMRSARQDEFL
RHEGVVIVATIAFGMGIDKPDVRFVCHADLPQSIEAYYQEIGRAGRDGLPAETLTLFSDA
DIRLREQQISASVAPRDRKLIEKRKLNALIALCETPHCRRQTLLAAFGETSKPCGNCDIC
DGKWPRFNGAIAAQKIMSAIHRTSGRFFPGHLANLLVGHASDAIRRHGHDLLPTFGVGKE
FNPAEWRSIFYQLHAAKLIAQDPEDRDRWIITKDGRAVLSGEAPLSLRGDIRLPSGRKVA
VRRSLQEIVVAQAKDPALPRQAFEPAKTDSDVVRLTAKENRLLAALKAKRLEVAREQKLP
AFIIFHDKVLIEMARARPKTREDMLAIPGIGPDKAVRYAAIFLSLIAVHSDES
NT seq
1962 nt
NT seq
+upstream
nt +downstream
nt
atgggaacgtttgatgtaacggttctagagcaaatcgcactcgaagatttgcggaacggg
gacgctgtgaacgcgcacatcgacgaggcgaaagaagcgctcacgcgggttttcggcttt
acagaattccgtcctggacaagaggaaattctcaaagccgtgttcgccggcgaacatatc
ctcgcagtgatgccgaccggggctggtaagtcgcttctctaccaattgccggcgatcgtg
cgcagggggctgacggtcgtcgtgtcgccgctaatcgccctgatgcgcgatcaggtgcag
cagctgcaagcgcgcgggattgccgccgccgcgctaaattcctcgaacagcggggaagat
aattcggagatcgaggcgggcctccggcgccgccgctatcgcatcctttatgtcgcgcca
gagcgactcgcgcgtgcggatacagcagagttgctccgtgcggcgggagccgatgtgttc
gccatcgacgaggcgcattgcgtctcgcaatgggggcacgatttccggcctgaatatctt
agccttgccgaagtggcgcgggcgatcggtcacgtgcagctcatcgcggtcacggcgacc
gccgatgagccgacccgtgccgacatcgtcaaaaaactctttgccgttcctccacaaatt
ttcgtgcgctccttcgacagaccaaacttgcatctttcgatggcgcgtaagaccgatgcc
acgcggcaaatcgaatcgatgatcgcgcgtcataaaggccacagcggcattatctattgc
aactcgcgcaagggtgtcgagaagctcgcggagtacctcggccagaaaggtgttctagca
ctcgcctatcacgccggccttgaagctggaatgagatcggcgcgccaggatgaattcctg
cgtcatgagggcgtcgtcatcgtcgccaccattgccttcggcatggggatcgacaaaccc
gacgtccgttttgtctgccacgctgatttaccgcagagcatcgaagcctattatcaggaa
atcggccgcgccgggcgcgacggcttgccggcggaaacgcttaccttattcagcgacgcc
gatatcaggctccgcgagcagcaaatttccgcaagcgtggcgccgcgagaccgcaagctg
atcgagaaacgcaagctcaatgctttgattgccttatgcgaaaccccgcattgccgccgt
cagaccctgctcgcggcttttggcgagacatcgaagccttgcggtaattgcgatatttgc
gatggcaaatggccgcgcttcaacggagccatagcagcgcagaaaatcatgtccgccatt
caccggacatcgggacgatttttccctggtcaccttgccaatcttcttgttgggcacgca
agtgatgcgatccggcggcacggtcatgatttgctgccgaccttcggcgttggcaaggag
ttcaatccggccgaatggcgaagcattttttatcagcttcacgcagcgaagctgatcgcg
caagaccctgaagatcgcgatcgttggatcattacgaaagatggacgtgccgtgctctcg
ggcgaggcgcctttgagcttgcgcggagatattcgcttgccgagcgggcgcaaagtggcc
gtgcggcgcagtttgcaagagatcgtggttgcgcaggccaaggatcctgcgttaccgcgc
caagcgttcgagcccgccaaaacagatagcgatgtggtgcgcctgaccgccaaggaaaat
cgcttgcttgccgccctcaaagccaagcgccttgaagttgcgcgggagcaaaagctgccc
gcctttatcatttttcatgacaaagttttgatcgaaatggcgcgagcgcgccccaaaacc
cgcgaagatatgcttgccattccgggaattgggccggacaaggctgttcgttacgccgcg
atcttcctttctctcatcgcagtccatagcgacgagtcatga
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