Methylocapsa sp. D3K7: QEV83_12415
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Entry
QEV83_12415 CDS
T08996
Symbol
holA
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
medk
Methylocapsa sp. D3K7
Pathway
medk03030
DNA replication
medk03430
Mismatch repair
medk03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
medk00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
QEV83_12415 (holA)
03430 Mismatch repair
QEV83_12415 (holA)
03440 Homologous recombination
QEV83_12415 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
medk03032
]
QEV83_12415 (holA)
03400 DNA repair and recombination proteins [BR:
medk03400
]
QEV83_12415 (holA)
Enzymes [BR:
medk01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
QEV83_12415 (holA)
DNA replication proteins [BR:
medk03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
QEV83_12415 (holA)
DNA repair and recombination proteins [BR:
medk03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
QEV83_12415 (holA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_delta
Motif
Other DBs
NCBI-ProteinID:
WGJ13497
LinkDB
All DBs
Position
2651165..2652172
Genome browser
AA seq
335 aa
AA seq
DB search
MVAVKNHEADRFLARPAPHIYLYLVFGTDAGLAAERAQKIIKAAIDDPKDPFQLVRIAGD
ELAADPLRLADEANTIPLFGGRRAILIEAQGKAFATALEPVLRGPPPQDCTIVVEAGALK
KDAPLRVLCERGKNAAAIQCYPDSAKDIAQLIEAEVAGSGLTIAPDAKAFLVSQLGQDRL
STRLEIEKLMLFAHGGGEIRLDHVEAIVSNASSLMAAKAVNAAFDGDLAALDAGLRDMAG
AGDHHMVLAGALRHALDLHRARPGASYEFTGAGFGQKDAFERHSRLWTQTGLVRAIGILS
EAIARTRREPKLGSSAAERALWSIAQSVRNKATAR
NT seq
1008 nt
NT seq
+upstream
nt +downstream
nt
gtggtcgcggtcaaaaaccacgaagcggaccgtttcctcgcacgccccgcgccacatatt
tatctgtacctcgtgtttggcacggatgcaggacttgccgccgagcgggcgcaaaaaatt
atcaaagccgccatcgatgatccgaaagacccctttcagctcgtgcgcatcgctggcgac
gaactggctgccgatcctttgcggctcgccgatgaggccaacacaattccgctgttcggt
ggcaggcgcgcgatcctgatcgaggcgcaaggcaaggcgtttgccaccgcgctcgaacca
gtgcttcgcgggcccccgccgcaagattgcacgatcgtcgtcgaagccggcgctttgaaa
aaagacgcgccattgcgggtgctgtgcgagcgcggcaaaaacgccgctgcgatccagtgt
tatccggattccgccaaggacatcgctcaattgatcgaagccgaggttgccgggagcggc
ctgacgattgctccggacgccaaagcgtttcttgtctcccagcttggccaggaccgcctc
tcgacgcgcttggagatcgaaaagctgatgctattcgcgcatggcggcggagaaatccgc
ctcgatcatgtcgaggccattgtcagcaatgcctcaagtctcatggccgccaaggctgtc
aatgcggcatttgatggggatcttgcagccctcgacgcgggtctgcgcgatatggcgggc
gcgggcgatcatcacatggtgctcgccggtgctttgcggcacgcactggacctgcatcgc
gctcgtcccggcgcttcttacgaatttacgggagcgggctttggacaaaaggatgccttc
gagcggcattcgcggctttggacgcaaacgggccttgtccgggcgatcggtatcctcagt
gaggcgatcgcgaggacgcgccgcgaaccaaaacttggatcttccgccgccgagcgggca
ctctggtcaattgcccaatccgtccgcaacaaagccaccgcgcggtga
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