Methylocapsa sp. D3K7: QEV83_13380
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Entry
QEV83_13380 CDS
T08996
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
medk
Methylocapsa sp. D3K7
Pathway
medk00300
Lysine biosynthesis
medk00470
D-Amino acid metabolism
medk01100
Metabolic pathways
medk01110
Biosynthesis of secondary metabolites
medk01120
Microbial metabolism in diverse environments
medk01230
Biosynthesis of amino acids
Module
medk_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
medk00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
QEV83_13380 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
QEV83_13380 (dapF)
Enzymes [BR:
medk01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
QEV83_13380 (dapF)
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Motif
Pfam:
DAP_epimerase
Motif
Other DBs
NCBI-ProteinID:
WGJ13674
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Position
complement(2842406..2843278)
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AA seq
290 aa
AA seq
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MSPLANRHAAKLNGIGNEIAVLDLRGTGLTVSGAEARAIARGDGLAFDQLMVLHEPRSTG
TDAYMTIYNRDGSQAESCGNGTRCVAFILLRGTPREKLVLETAAARLECQRKAETVFSVD
MGRARLAWNEIPLRDPFHDTRTIELQIGPIDAPILHTPSAVNMGNPHAIFWVDDIEAYDL
GKIGPLLEHHPIFPERANISLAHVISRTHIALKVWERGTGLTRACGSAACAALVAAVRKG
LTDRRATVSLPGGDLDIEWRQSDEHVLMTGPVEFEFETRLDPNLFKDIAA
NT seq
873 nt
NT seq
+upstream
nt +downstream
nt
atgagccccctcgccaataggcatgccgcaaaattgaatgggatcggcaacgaaatcgcc
gttctcgatctgcgcggtacgggcttgaccgtgagcggcgccgaggcgcgcgcgatcgca
aggggcgacggcctcgccttcgatcagctcatggtgctacacgagccgcgctccacgggc
accgatgcctatatgacgatctataacagggatggttcgcaggccgagagttgcggcaat
gggacacgctgcgtcgcctttatcctgttgcggggaacgccgcgcgaaaagcttgtcttg
gagactgccgccgcccggctcgaatgccagcgcaaggccgaaacggttttcagcgtcgat
atgggccgcgcgcgcctcgcctggaatgaaatcccgcttcgcgatccatttcatgacacg
cgcaccatcgaattgcagatcgggccgatcgatgcccccatcttgcacacgccgtcagcc
gtcaacatgggcaatccgcatgcgattttctgggtcgatgatatcgaggcctatgatctt
ggcaaaatcggcccattgctcgaacatcatcccatctttcccgagcgcgccaatatctcg
ctcgctcatgtcatctcccgcacccacatcgcgctcaaagtttgggagcgcggcaccggc
ttgacccgcgcctgcggctcggcggcctgcgccgcattggtcgcggcggttcgcaagggc
ctcacggaccggcgcgccaccgttagcctacccggcggcgatctcgacatcgaatggcgg
cagagcgatgagcatgttctaatgaccgggccggtcgaatttgaattcgagacccggctc
gatcctaatctcttcaaggacatcgcggcgtga
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