Methylocapsa sp. D3K7: QEV83_13595
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Entry
QEV83_13595 CDS
T08996
Symbol
addB
Name
(GenBank) double-strand break repair protein AddB
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
medk
Methylocapsa sp. D3K7
Brite
KEGG Orthology (KO) [BR:
medk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
medk03400
]
QEV83_13595 (addB)
Enzymes [BR:
medk01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
QEV83_13595 (addB)
DNA repair and recombination proteins [BR:
medk03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
QEV83_13595 (addB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDDEXK_1
Motif
Other DBs
NCBI-ProteinID:
WGJ13714
LinkDB
All DBs
Position
2881171..2884344
Genome browser
AA seq
1057 aa
AA seq
DB search
MQRANVFTIASGAPFLQTFVNSLFDGRVVEGFSKNLDPLEMADATIHVPTRRAARALAVE
LARATGCHSLLLPRILPLGALDESEPGLSIDDTGFGSSLEPGLPEAAGEIERRMRLAGLI
LAWAQAMRHAIVSVGAQGKYEYDTRESFLVAATPADAWHLAGELASLIDELIIEDVAWIK
LDPLVLPEFDSYWHITLDFLNIAIMEWPKILADRGLVDKAKRQVGFIEAQCRRLQTGAVT
GPVIAIGSTGSQSTTARLLAAIARAPRGAVVLRGLDQDLDAEAWALIPDGSREDAEASYT
HPQAALRRLLRILQVPRDDVVNLGEATPNLVMRGKFLSEALRPAEATGEWITYRGTAGAN
ELAAALQDVSLIEARDEREEALALAIAMREVLETPGSTAALVTPDRTLARRVGAELLRWD
VVANDSAGESLGASPIGVLARLASACAASEMAAPDLAALFAHPLLRLGLSRADVERRAAL
LETGLLRSLHAAGGLAGSIAGEPAALIARARQDASSHFAHPSKQQISENEWEDLQDFLVR
LGIQFAPLLNLRGHAALDQWVTAHRATIEAIASGEDDSAGEAREALDMLFDELAQNASDR
MIFDIESYDLFFASVAGEVILRDSGQTHPRLQILGLLEARLIQADVLLLGGLDETVWPPQ
ARTDAFLNRPMRAALGLTPPERKLGQTAHDFVQAMGNRRVILSRARKRDGAPTVASRFLQ
RMAALGGSAWEMCRKRGEVYLRLAEAIDRPNFDPQPSGRPLPRPPLALRPKRLSVTQIET
LRRDPYAIYAEKILRLKQLDPLGGASGVAEVGSAVHSTLERFVKGYPCGPLPSGAREMLA
TILREALAPQLQDADFVALQLPRLEKMIDFYLGFEARRRDRIKTIKIEAEGELDIGLADG
SKFLLAARADRIELNIDGTGTLVDYKTGAPPGNGEVFVGFAPQMTLEAAMWLRGAFDPGQ
KSETLEALYLKLGGALGGQERAVSFANVKANVMQKSFMDVSDDHFRGLVDLLNQFRNPAT
PYPPRPFPKYAKRYNAYDHLARVKEWSRGDEAEENGA
NT seq
3174 nt
NT seq
+upstream
nt +downstream
nt
atgcaacgcgcgaacgtctttacgatcgcctccggcgcgccatttctgcaaaccttcgtc
aattcactttttgacggccgcgttgtcgagggattttcaaaaaacctcgatcctctcgaa
atggcggacgccacgatccacgtgccgacgcgccgcgccgcccgcgcactcgcggttgaa
ctcgctcgcgcgaccggctgccattcgctgctgttgccgcgcatcctgccgcttggcgcg
ctcgacgagtccgaaccgggcctgtcgatcgacgatacgggatttgggtcctctcttgag
ccggggcttcccgaggcggcgggcgaaatcgaacggcggatgcggcttgcggggcttatc
ctcgcatgggcacaggccatgcgccacgcgatcgtttcggtcggcgcacaaggcaaatat
gagtatgacacgcgggagtcttttcttgtcgcggcgacccccgccgatgcctggcatttg
gctggcgaactcgccagcctcatcgacgaattgatcatcgaggacgtggcctggataaag
ctcgatccgctggtcttgccggagttcgattcctattggcacatcactctcgatttcctc
aatatcgcgatcatggaatggccgaagatactcgccgatcgcggacttgtggataaggcc
aagcggcaggtcgggttcatcgaggcgcaatgccgccgcttgcaaacaggcgccgtgacc
gggcccgtgatcgcgatcggctcaaccggatcgcagagcacgacggcgcggctgctcgcg
gccatcgcgcgtgcgccaaggggcgctgtcgttctacgtggacttgatcaggatctcgac
gccgaggcatgggcgttgatcccggacgggtccagagaggatgcagaggcatcctacacg
catccgcaagccgcgctacgccgtctccttcgcattctccaggtgccgcgtgatgatgtt
gtgaaccttggcgaggccacgccaaatcttgtcatgcgcggcaaattcttatcggaggct
ttgcggccggcggaggcgacaggcgagtggatcacctatcggggaaccgccggggccaac
gaacttgcggcggcgctgcaagacgtcagtttgatcgaggcccgcgatgaacgcgaggag
gccctcgccctcgctattgccatgcgggaagtcctggaaacaccgggcagcaccgcggcg
ctcgtcacgccggatcgcacgctcgcgcggcgggtgggcgcggaattgctgcgctgggat
gttgtggcaaatgattctgctggtgaatccctcggcgcgagcccgatcggtgtcctcgcg
cggctcgctagcgcctgcgccgccagtgaaatggcggcgccggaccttgccgcattgttc
gcgcatccactgttgcggctcgggctttcccgcgcggatgttgaaaggcgagcggcactt
cttgaaaccggtctattgcgttcgcttcatgccgcgggcggtcttgccgggagcattgcg
ggcgaaccggctgccttgatcgcacgcgcacggcaagacgcgagcagccatttcgcgcat
ccctctaagcagcaaatttccgaaaatgaatgggaagatctgcaagattttttggtgcgg
ctaggcattcaattcgcgccgcttctgaatttgcgcgggcatgccgcattggaccagtgg
gtgacggcgcatcgtgcaacgatcgaggccatcgccagcggcgaggacgatagcgccggc
gaggcgcgcgaggccttggacatgctcttcgatgaactggcgcaaaatgcgtccgatcgc
atgatttttgacattgaatcctacgatctctttttcgcatcggttgcgggcgaagtcatc
ctgcgagactctggacaaacgcatccacgcctacaaatcctcggcctcctcgaagcacgc
ctcatccaagccgatgtccttttgctgggcggcctcgacgaaacggtgtggccgccgcaa
gcgcgcaccgatgcttttctcaatcgcccgatgcgcgccgctctagggctcacgccgcct
gagcgcaaactcggccaaacagcgcatgatttcgtgcaagccatgggcaaccggcgggtg
attttaagccgcgcccgcaaacgcgatggcgcccctaccgtggcatccaggtttctgcag
cgtatggcggcgcttggcggctctgcgtgggagatgtgccgcaaacgcggagaggtttat
ctgcgccttgcggaagccatcgatcggccaaattttgatccgcaaccaagcggcaggccg
ctgccgagaccaccgctcgcgctgcgtccgaagcgcctcagcgtcacccaaatcgagaca
ttgcggcgcgacccctacgccatttatgccgaaaaaattctgcgtctgaagcagctcgat
cctctcggaggcgcgtcgggcgtggccgaagttggcagcgcggtccattctacgctggag
cgatttgtcaaaggttacccctgtgggcctctgccgtcaggtgcccgcgaaatgctcgcc
accattctgcgcgaagcgctcgcgccgcaattgcaagacgcggatttcgtggcgctccaa
ttgccgcggctcgaaaagatgatcgatttctatctcgggttcgaagcaagacgccgcgat
cggattaagacgattaaaatcgaggccgagggcgaactcgatattggtcttgccgatggt
tcaaagtttctgctggcggcgcgggcggaccggatcgaactgaacattgatggaacgggg
accctcgtcgattataaaaccggcgcgccgcccggaaatggtgaagtttttgtgggcttt
gcgccgcagatgaccttggaagcggcgatgtggcttcgcggagccttcgatcccggccaa
aagagcgagacactcgaggcactttatttaaaactcggcggcgctctggggggccaggaa
agggccgtttcgtttgccaatgtcaaagccaatgtaatgcaaaagagctttatggacgtc
tcggacgatcattttcgcggtctcgttgatcttctaaatcagttccgcaatcccgcgaca
ccctatccgccgcgtccgttcccgaaatatgcaaaacgttataacgcctacgaccatctt
gctcgcgtgaaggaatggtcgcggggcgatgaggccgaggagaatggtgcgtaa
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