Methylocapsa sp. D3K7: QEV83_15850
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Entry
QEV83_15850 CDS
T08996
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
medk
Methylocapsa sp. D3K7
Brite
KEGG Orthology (KO) [BR:
medk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
medk03009
]
QEV83_15850 (rimO)
Enzymes [BR:
medk01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
QEV83_15850 (rimO)
Ribosome biogenesis [BR:
medk03009
]
Prokaryotic type
ribosomal protein modification factors
QEV83_15850 (rimO)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
UPF0004
TRAM_2
TRAM
Homeobox_KN
YajR_YAM
CLP1_P
Motif
Other DBs
NCBI-ProteinID:
WGJ14111
LinkDB
All DBs
Position
3358275..3359627
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AA seq
450 aa
AA seq
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MNSESIPASSASAQLAPKISFVSLGCPKALVDSERIIGRLRAEGYELSKTHQDAAAVIVN
TCGFLDSAKAESLAAIGAAAAENGKVIVTGCMGAEPGAILEQFPDLRWISGPQDFASVMQ
AVHEAAPPPHDPFLDLVPPQGIKLTPRHYAYLKISEGCNNRCTFCIIPKLRGDLVSRPAA
DVLREAEKLVAAGVKELLVISQDTSAYGVDLKYAESAFQERPVRAKFFDLARELGQLGVW
IRLHYVYPYPHVDEVIELMAEGKILPYLDIPFQHASPKILRAMKRPGDTDKTLERIAKWR
EICPDLSLRSTFIVGFPGESEEDFELLLDWLQEAKIDRAGAFKYEPVAGAAANDLGLPHV
PPEVQENRYKRFMETCQKISAKKLKDKIGKRLPVILDHGGQSSGIGRTKGDAPEIDGKVH
VAARRPLRQGDIVTVKIERADAYDLHGTAV
NT seq
1353 nt
NT seq
+upstream
nt +downstream
nt
atgaattcagagtcaatccccgcatcctctgcttcggcgcagctcgcgcccaaaatttcc
ttcgtgtcgctcggctgtccaaaggcgctcgtcgatagcgagcggatcatcggccgtttg
cgggcggagggctacgaactgtccaagacgcatcaagacgctgcggcagtcatcgtcaac
acttgcggctttctcgatagtgccaaagcggaatcactggcggccataggcgcggccgcg
gccgaaaatggcaaggtcatcgtcaccggctgcatgggcgccgagcccggtgcgattttg
gaacaattcccagaccttcgctggatcagcgggccgcaggattttgcctccgtcatgcaa
gccgtgcatgaagcggcgccgccgccgcatgatccttttctcgatctcgtgccgccacaa
ggcatcaaactgacgccgcgccactatgcttatttgaaaatttcggaaggctgcaacaac
cgctgcaccttctgcatcatcccaaaactgcgcggcgatctcgtgtcccgcccggcagct
gatgttttgcgcgaagcggaaaagctcgtcgctgcgggcgtcaaggaattgctcgtcatc
tcgcaagatacgagcgcctatggcgttgatctaaaatatgccgaaagcgcatttcaggag
cgtccggtccgggcgaaatttttcgacctcgcgcgggagcttggccaactcggcgtgtgg
atcagactccactatgtctatccctatccgcatgtcgatgaggtcatcgaattgatggca
gagggaaaaatcctcccctatctcgacattccatttcagcacgcaagcccaaaaattctt
cgcgcgatgaagcggccaggcgacaccgataagacgctcgaacggattgcgaaatggcgc
gaaatctgccctgatctgagcttgcgctcgacctttatcgtcggttttcccggcgagagc
gaggaagatttcgagctgctgctcgattggcttcaagaggcaaagatcgaccgcgcaggc
gccttcaaatatgagccggtcgcgggcgcggcggcgaacgatcttggcctgccgcatgtg
ccgccggaggtgcaagaaaaccgctacaagcggttcatggaaacatgccagaaaatcagc
gctaaaaaactcaaggataagattggcaaacgtcttccggtcattctcgatcacggtggc
cagagctcgggcattggccgcactaagggtgacgcccccgagatcgacggcaaggttcat
gtcgctgcgcgccgccccttgcggcagggcgatatcgtcaccgtgaaaatcgagagggcg
gacgcctatgatttgcacgggacagcggtataa
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